Regulon of NhaR in Shewanella woodyi ATCC 51908
| Regulator type: | Transcription factor |
| TF locus tag: | Swoo_1233 |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Osmotic stress response |
| Effector: | Potassium ion |
| Regulog: | NhaR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - LysR
- By effector - Potassium ion
- By pathway - Osmotic stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -88
Score: 5.2 Sequence: CCTCGATCGTATCGAGG
Locus tag: Swoo_2421
Name: ccoH Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Swoo_2420
Name: ccoI Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Swoo_2419
Name: ccoS Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Swoo_2418
Name: SO2357 Funciton: Integral membrane protein
Locus tag: Swoo_2417
Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein, Crp family |
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ccoH
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Cbb3-type cytochrome oxidase assembly protein
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ccoI
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Cbb3-type cytochrome oxidase, copper translocating P-ATPase
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ccoS
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Cbb3-type cytochrome oxidase assembly protein
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SO2357
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Integral membrane protein
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fnr
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Fumarate and nitrate reduction regulatory protein, Crp family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |