Profile of regulator NhaR in Shewanellaceae
Properties
| Regulator family: |
LysR |
| Regulation mode: |
activator |
| Biological process: |
Osmotic stress response |
| Effector: |
Potassium ion |
| Regulog: |
NhaR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_2360 |
ccoH |
-88 |
5.6 |
CCTCGATAACCTCGAGG |
|
SO_1336 |
nhaA |
-97 |
5.6 |
CCTCGGAATAGCCGAGG |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_1147 |
nhaA |
-96 |
5.6 |
CCTCGGAATAGCCGAGG |
|
Sputcn32_1955 |
ccoH |
-86 |
5.5 |
CCTCGAGAGTATCGAGG |
|
Shewanella sp W3-18-1
|
|
Sputw3181_3017 |
nhaA |
-96 |
5.6 |
CCTCGGAATAGCCGAGG |
|
Sputw3181_2050 |
ccoH |
-86 |
5.5 |
CCTCGAGAGTATCGAGG |
|
Shewanella sp ANA-3
|
|
Shewana3_2111 |
ccoH |
-88 |
5.6 |
CCTCGATAACGTCGAGG |
|
Shewana3_3038 |
nhaA |
-97 |
6 |
CCTCGGAATTATCGAGG |
|
Shewana3_3690 |
otr |
-30 |
5.5 |
CCTCGGTACTGCCGAGG |
|
Shewanella sp MR-4
|
|
Shewmr4_2010 |
ccoH |
-88 |
5.6 |
CCTCGATAACGTCGAGG |
|
Shewmr4_2860 |
nhaA |
-96 |
5.7 |
CCTCGGAATTAACGAGG |
|
Shewmr4_3513 |
otr |
-30 |
5.9 |
CCTCGGTATTGCCGAGG |
|
Shewanella sp MR-7
|
|
Shewmr7_1965 |
ccoH |
-88 |
5.6 |
CCTCGATAACGTCGAGG |
|
Shewmr7_2942 |
nhaA |
-96 |
5.7 |
CCTCGGAATTAACGAGG |
|
Shewmr7_0439 |
otr |
-30 |
5.6 |
CCTCGGTATCGCCGAGG |
|
Shewanella baltica OS155
|
|
Sbal_2205 |
ccoH |
-88 |
5.4 |
CCTCGAAGACTTCGAGG |
|
Sbal_1189 |
nhaA |
-96 |
5.8 |
CCTCGGAATAACCGAGG |
|
Shewanella denitrificans OS217
|
|
Sden_2778 |
nhaA |
-93 |
4.4 |
TATCGGTATTATCGATA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_2941 |
nhaA |
-94 |
5 |
CCTCGGTTAAACCGAGT |
|
Sfri_2014 |
ccoH |
-94 |
5.9 |
CCTCGAGATTATCGAGG |
|
Shewanella amazonensis SB2B
|
|
Sama_0868 |
nhaA |
-98 |
5.9 |
CCTCGGAAATTTCGAGG |
|
Shewanella loihica PV-4
|
|
Shew_1042 |
nhaA |
-97 |
5.6 |
CCTCGGAATTACCGATG |
|
Shewanella pealeana ATCC 700345
|
|
Spea_2218 |
ccoH |
-115 |
5.3 |
CCTCGTTAACAACGAGG |
|
Spea_1025 |
nhaA |
-97 |
4.6 |
CTTCGGATATTCCGACG |
|
Spea_1025 |
nhaA |
-292 |
4.7 |
GCTCGTTATTTTCGATG |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_2201 |
ccoH |
-114 |
5.3 |
CCTCGTCATTAACGAGG |
|
Shal_1071 |
nhaA |
-97 |
4.6 |
CTTCGGATATCCCGATG |
|
Shal_1071 |
nhaA |
-292 |
4.7 |
CTTCGATTTTTTCGAGT |
|
Shewanella piezotolerans WP3
|
|
swp_2576 |
ccoH |
-103 |
4.9 |
CCTCGTCACTTACGAGG |
|
swp_3792 |
nhaA |
-174 |
5.3 |
CCTCGGATATTCCGATG |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_2215 |
ccoH |
-88 |
5.6 |
CCTCGATCTTATCGAGG |
|
Ssed_1136 |
nhaA |
-96 |
5.5 |
CCTCGGGAATACCGATG |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_2421 |
ccoH |
-88 |
5.2 |
CCTCGATCGTATCGAGG |
Export
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Regulatory Sites
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