Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NhaR in Shewanellaceae

Properties
Regulator family: LysR
Regulation mode: activator
Biological process: Osmotic stress response
Effector: Potassium ion
Regulog: NhaR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_2360 ccoH -88 5.6 CCTCGATAACCTCGAGG
SO_1336 nhaA -97 5.6 CCTCGGAATAGCCGAGG
Shewanella putrefaciens CN-32
Sputcn32_1147 nhaA -96 5.6 CCTCGGAATAGCCGAGG
Sputcn32_1955 ccoH -86 5.5 CCTCGAGAGTATCGAGG
Shewanella sp W3-18-1
Sputw3181_3017 nhaA -96 5.6 CCTCGGAATAGCCGAGG
Sputw3181_2050 ccoH -86 5.5 CCTCGAGAGTATCGAGG
Shewanella sp ANA-3
Shewana3_2111 ccoH -88 5.6 CCTCGATAACGTCGAGG
Shewana3_3038 nhaA -97 6 CCTCGGAATTATCGAGG
Shewana3_3690 otr -30 5.5 CCTCGGTACTGCCGAGG
Shewanella sp MR-4
Shewmr4_2010 ccoH -88 5.6 CCTCGATAACGTCGAGG
Shewmr4_2860 nhaA -96 5.7 CCTCGGAATTAACGAGG
Shewmr4_3513 otr -30 5.9 CCTCGGTATTGCCGAGG
Shewanella sp MR-7
Shewmr7_1965 ccoH -88 5.6 CCTCGATAACGTCGAGG
Shewmr7_2942 nhaA -96 5.7 CCTCGGAATTAACGAGG
Shewmr7_0439 otr -30 5.6 CCTCGGTATCGCCGAGG
Shewanella baltica OS155
Sbal_2205 ccoH -88 5.4 CCTCGAAGACTTCGAGG
Sbal_1189 nhaA -96 5.8 CCTCGGAATAACCGAGG
Shewanella denitrificans OS217
Sden_2778 nhaA -93 4.4 TATCGGTATTATCGATA
Shewanella frigidimarina NCIMB 400
Sfri_2941 nhaA -94 5 CCTCGGTTAAACCGAGT
Sfri_2014 ccoH -94 5.9 CCTCGAGATTATCGAGG
Shewanella amazonensis SB2B
Sama_0868 nhaA -98 5.9 CCTCGGAAATTTCGAGG
Shewanella loihica PV-4
Shew_1042 nhaA -97 5.6 CCTCGGAATTACCGATG
Shewanella pealeana ATCC 700345
Spea_2218 ccoH -115 5.3 CCTCGTTAACAACGAGG
Spea_1025 nhaA -97 4.6 CTTCGGATATTCCGACG
Spea_1025 nhaA -292 4.7 GCTCGTTATTTTCGATG
Shewanella halifaxensis HAW-EB4
Shal_2201 ccoH -114 5.3 CCTCGTCATTAACGAGG
Shal_1071 nhaA -97 4.6 CTTCGGATATCCCGATG
Shal_1071 nhaA -292 4.7 CTTCGATTTTTTCGAGT
Shewanella piezotolerans WP3
swp_2576 ccoH -103 4.9 CCTCGTCACTTACGAGG
swp_3792 nhaA -174 5.3 CCTCGGATATTCCGATG
Shewanella sediminis HAW-EB3
Ssed_2215 ccoH -88 5.6 CCTCGATCTTATCGAGG
Ssed_1136 nhaA -96 5.5 CCTCGGGAATACCGATG
Shewanella woodyi ATCC 51908
Swoo_2421 ccoH -88 5.2 CCTCGATCGTATCGAGG
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