Regulon of NhaR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shal_1073
Regulator family:	LysR
Regulation mode:	activator
Biological process:	Osmotic stress response
Effector:	Potassium ion
Regulog:	NhaR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Potassium ion
By pathway - Osmotic stress response

Regulated operons
	Locus Tag	Name	Function
Position: -114 Score: 5.3 Sequence: CCTCGTCATTAACGAGG Locus tag: Shal_2201 Name: ccoH Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Shal_2202 Name: ccoI Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase Locus tag: Shal_2203 Name: ccoS Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Shal_2204 Name: SO2357 Funciton: Integral membrane protein Locus tag: Shal_2205 Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
	Shal_2201	ccoH	Cbb3-type cytochrome oxidase assembly protein
	Shal_2202	ccoI	Cbb3-type cytochrome oxidase, copper translocating P-ATPase
	Shal_2203	ccoS	Cbb3-type cytochrome oxidase assembly protein
	Shal_2204	SO2357	Integral membrane protein
	Shal_2205	fnr	Fumarate and nitrate reduction regulatory protein, Crp family
Position: -292 Score: 4.7 Sequence: CTTCGATTTTTTCGAGT Position: -97 Score: 4.6 Sequence: CTTCGGATATCCCGATG Locus tag: Shal_1071 Name: nhaA Funciton: Na+/H+ antiporter NhaA Locus tag: Shal_1072 Name: SO1337 Funciton: hypothetical protein Locus tag: Shal_1073 Name: nhaR Funciton: Transcriptional activator of sodium-proton antiporter, LysR family
	Shal_1071	nhaA	Na+/H+ antiporter NhaA
	Shal_1072	SO1337	hypothetical protein
	Shal_1073	nhaR	Transcriptional activator of sodium-proton antiporter, LysR family

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