Regulon of NhaR in Shewanella sediminis HAW-EB3

Properties
Regulator type:	Transcription factor
TF locus tag:	Ssed_1138
Regulator family:	LysR
Regulation mode:	activator
Biological process:	Osmotic stress response
Effector:	Potassium ion
Regulog:	NhaR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Potassium ion
By pathway - Osmotic stress response

Regulated operons
	Locus Tag	Name	Function
Position: -88 Score: 5.6 Sequence: CCTCGATCTTATCGAGG Locus tag: Ssed_2215 Name: ccoH Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Ssed_2216 Name: ccoI Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase Locus tag: Ssed_2217 Name: ccoS Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Ssed_2218 Name: SO2357 Funciton: Integral membrane protein Locus tag: Ssed_2219 Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
	Ssed_2215	ccoH	Cbb3-type cytochrome oxidase assembly protein
	Ssed_2216	ccoI	Cbb3-type cytochrome oxidase, copper translocating P-ATPase
	Ssed_2217	ccoS	Cbb3-type cytochrome oxidase assembly protein
	Ssed_2218	SO2357	Integral membrane protein
	Ssed_2219	fnr	Fumarate and nitrate reduction regulatory protein, Crp family
Position: -96 Score: 5.5 Sequence: CCTCGGGAATACCGATG Locus tag: Ssed_1136 Name: nhaA Funciton: Na+/H+ antiporter NhaA Locus tag: Ssed_1137 Name: SO1337 Funciton: hypothetical protein Locus tag: Ssed_1138 Name: nhaR Funciton: Transcriptional activator of sodium-proton antiporter, LysR family
	Ssed_1136	nhaA	Na+/H+ antiporter NhaA
	Ssed_1137	SO1337	hypothetical protein
	Ssed_1138	nhaR	Transcriptional activator of sodium-proton antiporter, LysR family

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