Regulon of NhaR in Shewanella sp MR-4
| Regulator type: | Transcription factor |
| TF locus tag: | Shewmr4_2858 |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Osmotic stress response |
| Effector: | Potassium ion |
| Regulog: | NhaR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - LysR
- By effector - Potassium ion
- By pathway - Osmotic stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -96
Score: 5.7 Sequence: CCTCGGAATTAACGAGG
Locus tag: Shewmr4_2860
Name: nhaA Funciton: Na+/H+ antiporter NhaA
Locus tag: Shewmr4_2859
Name: SO1337 Funciton: hypothetical protein
Locus tag: Shewmr4_2858
Name: nhaR Funciton: Transcriptional activator of sodium-proton antiporter, LysR family |
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nhaA
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Na+/H+ antiporter NhaA
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SO1337
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hypothetical protein
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nhaR
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Transcriptional activator of sodium-proton antiporter, LysR family
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Position: -30
Score: 5.9 Sequence: CCTCGGTATTGCCGAGG
Locus tag: Shewmr4_3513
Name: otr Funciton: Octaheme tetrathionate reductase |
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otr
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Octaheme tetrathionate reductase
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Position: -88
Score: 5.6 Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewmr4_2010
Name: ccoH Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2011
Name: ccoI Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shewmr4_2012
Name: ccoS Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2013
Name: SO2357 Funciton: Integral membrane protein
Locus tag: Shewmr4_2014
Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein, Crp family |
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ccoH
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Cbb3-type cytochrome oxidase assembly protein
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ccoI
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Cbb3-type cytochrome oxidase, copper translocating P-ATPase
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ccoS
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Cbb3-type cytochrome oxidase assembly protein
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SO2357
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Integral membrane protein
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fnr
|
Fumarate and nitrate reduction regulatory protein, Crp family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |