Regulon of NhaR in Shewanella sp MR-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewmr4_2858
Regulator family:	LysR
Regulation mode:	activator
Biological process:	Osmotic stress response
Effector:	Potassium ion
Regulog:	NhaR - Shewanellaceae
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Potassium ion
By pathway - Osmotic stress response

Regulated operons
	Locus Tag	Name	Function
Position: -96 Score: 5.7 Sequence: CCTCGGAATTAACGAGG Locus tag: Shewmr4_2860 Name: nhaA Funciton: Na+/H+ antiporter NhaA Locus tag: Shewmr4_2859 Name: SO1337 Funciton: hypothetical protein Locus tag: Shewmr4_2858 Name: nhaR Funciton: Transcriptional activator of sodium-proton antiporter, LysR family
	Shewmr4_2860	nhaA	Na+/H+ antiporter NhaA
	Shewmr4_2859	SO1337	hypothetical protein
	Shewmr4_2858	nhaR	Transcriptional activator of sodium-proton antiporter, LysR family
Position: -30 Score: 5.9 Sequence: CCTCGGTATTGCCGAGG Locus tag: Shewmr4_3513 Name: otr Funciton: Octaheme tetrathionate reductase
	Shewmr4_3513	otr	Octaheme tetrathionate reductase
Position: -88 Score: 5.6 Sequence: CCTCGATAACGTCGAGG Locus tag: Shewmr4_2010 Name: ccoH Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Shewmr4_2011 Name: ccoI Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase Locus tag: Shewmr4_2012 Name: ccoS Funciton: Cbb3-type cytochrome oxidase assembly protein Locus tag: Shewmr4_2013 Name: SO2357 Funciton: Integral membrane protein Locus tag: Shewmr4_2014 Name: fnr Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
	Shewmr4_2010	ccoH	Cbb3-type cytochrome oxidase assembly protein
	Shewmr4_2011	ccoI	Cbb3-type cytochrome oxidase, copper translocating P-ATPase
	Shewmr4_2012	ccoS	Cbb3-type cytochrome oxidase assembly protein
	Shewmr4_2013	SO2357	Integral membrane protein
	Shewmr4_2014	fnr	Fumarate and nitrate reduction regulatory protein, Crp family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD