Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NhaR in Shewanella sp MR-4

Properties
Regulator type: Transcription factor
TF locus tag: Shewmr4_2858
Regulator family: LysR
Regulation mode: activator
Biological process: Osmotic stress response
Effector: Potassium ion
Regulog: NhaR - Shewanellaceae
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 33 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -96
Score: 5.7
Sequence: CCTCGGAATTAACGAGG
Locus tag: Shewmr4_2860
Name: nhaA
Funciton: Na+/H+ antiporter NhaA
Locus tag: Shewmr4_2859
Name: SO1337
Funciton: hypothetical protein
Locus tag: Shewmr4_2858
Name: nhaR
Funciton: Transcriptional activator of sodium-proton antiporter, LysR family
nhaA
Na+/H+ antiporter NhaA
SO1337
hypothetical protein
nhaR
Transcriptional activator of sodium-proton antiporter, LysR family

Position: -30
Score: 5.9
Sequence: CCTCGGTATTGCCGAGG
Locus tag: Shewmr4_3513
Name: otr
Funciton: Octaheme tetrathionate reductase
otr
Octaheme tetrathionate reductase

Position: -88
Score: 5.6
Sequence: CCTCGATAACGTCGAGG
Locus tag: Shewmr4_2010
Name: ccoH
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2011
Name: ccoI
Funciton: Cbb3-type cytochrome oxidase, copper translocating P-ATPase
Locus tag: Shewmr4_2012
Name: ccoS
Funciton: Cbb3-type cytochrome oxidase assembly protein
Locus tag: Shewmr4_2013
Name: SO2357
Funciton: Integral membrane protein
Locus tag: Shewmr4_2014
Name: fnr
Funciton: Fumarate and nitrate reduction regulatory protein, Crp family
ccoH
Cbb3-type cytochrome oxidase assembly protein
ccoI
Cbb3-type cytochrome oxidase, copper translocating P-ATPase
ccoS
Cbb3-type cytochrome oxidase assembly protein
SO2357
Integral membrane protein
fnr
Fumarate and nitrate reduction regulatory protein, Crp family
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