Regulon of ManR2 in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_0294
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Mannose utilization; Mannosides utilization
Effector:	Mannose
Regulog:	ManR2 - Shewanellaceae
Statistics of regulated genes:
- Genes	17
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LacI
By effector - Mannose
By pathway - Mannose utilization
By pathway - Mannosides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -184 Score: 6.3 Sequence: AGATGTAATCGATTCCATAA Position: -90 Score: 6.7 Sequence: AAATGTAATCGATTACAGTG Locus tag: Sama_0293 Name: mnnA3 Funciton: Alpha-1,2-mannosidase Locus tag: Sama_0292 Name: manP2 Funciton: Predicted mannose transporter, GGP family Locus tag: Sama_0291 Name: manK2 Funciton: Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4) Locus tag: Sama_0290 Name: manI2 Funciton: D-mannose isomerase (EC 5.3.1.7) Locus tag: Sama_0289 Name: mnnA4 Funciton: Alpha-1,2-mannosidase Locus tag: Sama_0288 Name: mnnA5 Funciton: Alpha-1,2-mannosidase
	Sama_0293	mnnA3	Alpha-1,2-mannosidase
	Sama_0292	manP2	Predicted mannose transporter, GGP family
	Sama_0291	manK2	Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4)
	Sama_0290	manI2	D-mannose isomerase (EC 5.3.1.7)
	Sama_0289	mnnA4	Alpha-1,2-mannosidase
	Sama_0288	mnnA5	Alpha-1,2-mannosidase
Position: -220 Score: 6.7 Sequence: CACTGTAATCGATTACATTT Position: -126 Score: 6.3 Sequence: TTATGGAATCGATTACATCT Locus tag: Sama_0294 Name: manR2 Funciton: Transcriptional regulator of mannoside utilization, variant 2, LacI family
	Sama_0294	manR2	Transcriptional regulator of mannoside utilization, variant 2, LacI family
Position: -149 Score: 6.8 Sequence: CAATGTAATCGATTACATTA Locus tag: Sama_0295 Name: omp(Man) Funciton: Mannosides-regulated TonB-dependent outer membrane receptor Locus tag: Sama_0296 Name: mnnA6 Funciton: Alpha-1,2-mannosidase Locus tag: Sama_0297 Name: mnnA7 Funciton: Endo-alpha-mannosidase Locus tag: Sama_0298 Name: nagK2 Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Sama_0299 Name: null Funciton: L-asparaginase (EC 3.5.1.1) Locus tag: Sama_0300 Name: ATL Funciton: Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96) Locus tag: Sama_0301 Name: null Funciton: Cytoplasmic copper homeostasis protein cutC Locus tag: Sama_0302 Name: mnnB Funciton: Beta-mannosidase (EC 3.2.1.25) Locus tag: Sama_0303 Name: manP3 Funciton: Predicted sodium-dependent mannose transporter Locus tag: Sama_0304 Name: mnnA8 Funciton: Alpha-1,2-mannosidase
	Sama_0295	omp(Man)	Mannosides-regulated TonB-dependent outer membrane receptor
	Sama_0296	mnnA6	Alpha-1,2-mannosidase
	Sama_0297	mnnA7	Endo-alpha-mannosidase
	Sama_0298	nagK2	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Sama_0299		L-asparaginase (EC 3.5.1.1)
	Sama_0300	ATL	Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)
	Sama_0301		Cytoplasmic copper homeostasis protein cutC
	Sama_0302	mnnB	Beta-mannosidase (EC 3.2.1.25)
	Sama_0303	manP3	Predicted sodium-dependent mannose transporter
	Sama_0304	mnnA8	Alpha-1,2-mannosidase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of ManR2 in Shewanella amazonensis SB2B

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --