Regulon of IolR in Streptomyces scabiei 87.22
| Regulator type: | Transcription factor |
| TF locus tag: | SCAB_18221, SCAB_19081 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Inositol utilization |
| Effector: | |
| Regulog: | IolR - Streptomycetaceae |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 6 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By TF family - GntR/Others
- By pathway - Inositol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -65
Score: 4.7 Sequence: CTCATGTCAGGACAATGC
Locus tag: SCAB_19081
Name: iolR Funciton: Inositol utilization transcriptional regulator, GntR family |
|||
|
iolR
|
Inositol utilization transcriptional regulator, GntR family
|
||
|
Position: -56
Score: 5 Sequence: CGGTTGTCCGGACAAAGC
Locus tag: SCAB_18231
Name: iolG Funciton: Inositol 2-dehydrogenase (EC 1.1.1.18 ) |
|||
|
iolG
|
Inositol 2-dehydrogenase (EC 1.1.1.18 )
|
||
|
Position: -91
Score: 5 Sequence: GCTTTGTCCGGACAACCG
Locus tag: SCAB_18221
Name: iolR1 Funciton: Inositol utilization transcriptional regulator, GntR family
Locus tag: SCAB_18211
Name: SCO6259 Funciton: Putative sugar kinase |
|||
|
iolR1
|
Inositol utilization transcriptional regulator, GntR family
|
||
|
SCO6259
|
Putative sugar kinase
|
||
|
Position: -248
Score: 4.6 Sequence: GCTTTGTACTGACATCCT
Position: -216
Score: 4.7 Sequence: ATAATGTCTTAACAAAGT
Locus tag: SCAB_19051
Name: iolTA2 Funciton: Inositol ABC transport system sugar-binding protein
Locus tag: SCAB_19041
Name: iolTB2 Funciton: Inositol ABC transport system permease protein
Locus tag: SCAB_19031
Name: iolTC2 Funciton: Inositol ABC transport system ATP-binding protein |
|||
|
iolTA2
|
Inositol ABC transport system sugar-binding protein
|
||
|
iolTB2
|
Inositol ABC transport system permease protein
|
||
|
iolTC2
|
Inositol ABC transport system ATP-binding protein
|
||
|
Position: -63
Score: 5.1 Sequence: ACTTTGTCCAGACATTCG
Locus tag: SCAB_58881
Name: iolE Funciton: Inosose dehydratase (EC 4.2.1.44) |
|||
|
iolE
|
Inosose dehydratase (EC 4.2.1.44)
|
||
|
Position: -79
Score: 5.1 Sequence: CGAATGTCTGGACAAAGT
Locus tag: SCAB_58891
Name: iolC Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
Locus tag: SCAB_58901
Name: iolJ Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
Locus tag: SCAB_58911
Name: iolB Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Locus tag: SCAB_58921
Name: iolD Funciton: Epi-inositol hydrolase (EC 3.7.1.-)
Locus tag: SCAB_58931
Name: iolA Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
|||
|
iolC
|
5-keto-2-deoxygluconokinase (EC 2.7.1.92)
|
||
|
iolJ
|
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
|
||
|
iolB
|
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
|
||
|
iolD
|
Epi-inositol hydrolase (EC 3.7.1.-)
|
||
|
iolA
|
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |