Regulon of MalR in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_1870
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Maltodextrin utilization
Effector:	Maltose
Regulog:	MalR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 67 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LacI
By effector - Maltose
By pathway - Maltodextrin utilization

Regulated operons
	Locus Tag	Name	Function
Position: -316 Score: 5.6 Sequence: GATGAATACGTATGTAAT Locus tag: Shew_1874 Name: malT Funciton: Predicted maltose transporter MalT Locus tag: Shew_1873 Name: cga Funciton: Glucoamylase (EC 3.2.1.3)
	Shew_1874	malT	Predicted maltose transporter MalT
	Shew_1873	cga	Glucoamylase (EC 3.2.1.3)
Position: -343 Score: 6.2 Sequence: ACTGCATACGTATGCAAA Position: -192 Score: 6.1 Sequence: TTTGAATACGTATGCATA Locus tag: Shew_1888 Name: omp(Mal) Funciton: Predicted maltose-specific TonB-dependent receptor Locus tag: Shew_1887 Name: susA Funciton: Neopullulanase (EC 3.2.1.135) Locus tag: Shew_1886 Name: amy2 Funciton: Alpha-amylase (EC 3.2.1.1)
	Shew_1888	omp(Mal)	Predicted maltose-specific TonB-dependent receptor
	Shew_1887	susA	Neopullulanase (EC 3.2.1.135)
	Shew_1886	amy2	Alpha-amylase (EC 3.2.1.1)
Position: -164 Score: 5.9 Sequence: GGTGAATACGTATGCAGC Locus tag: Shew_1876 Name: susB Funciton: Alpha-glucosidase (EC 3.2.1.20)
	Shew_1876	susB	Alpha-glucosidase (EC 3.2.1.20)
Position: -311 Score: 6.1 Sequence: TATGCATACGTATTCAAA Position: -160 Score: 6.2 Sequence: TTTGCATACGTATGCAGT Locus tag: Shew_1889 Name: malZ Funciton: Maltodextrin glucosidase (EC 3.2.1.20) Locus tag: Shew_1890 Name: glcP Funciton: Predicted glucose transporter in maltodextrin utilization gene cluster
	Shew_1889	malZ	Maltodextrin glucosidase (EC 3.2.1.20)
	Shew_1890	glcP	Predicted glucose transporter in maltodextrin utilization gene cluster

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD