Regulon of MalR in Shewanella denitrificans OS217
| Regulator type: | Transcription factor |
| TF locus tag: | Sden_1820 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Maltodextrin utilization |
| Effector: | Maltose |
| Regulog: | MalR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - LacI
- By effector - Maltose
- By pathway - Maltodextrin utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -292
Score: 6.1 Sequence: TATGCATACGTATTCAAT
Position: -143
Score: 6.2 Sequence: TTTGCATACGTATGCAGT
Locus tag: Sden_2028
Name: malZ Funciton: Maltodextrin glucosidase (EC 3.2.1.20)
Locus tag: Sden_2027
Name: glcP Funciton: Predicted glucose transporter in maltodextrin utilization gene cluster |
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malZ
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Maltodextrin glucosidase (EC 3.2.1.20)
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glcP
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Predicted glucose transporter in maltodextrin utilization gene cluster
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Position: -354
Score: 6.2 Sequence: ACTGCATACGTATGCAAA
Position: -205
Score: 6.1 Sequence: ATTGAATACGTATGCATA
Locus tag: Sden_2029
Name: omp(Mal) Funciton: Predicted maltose-specific TonB-dependent receptor
Locus tag: Sden_2030
Name: trpH Funciton: Tryptophan halogenase
Locus tag: Sden_2031
Name: susA Funciton: Neopullulanase (EC 3.2.1.135)
Locus tag: Sden_2032
Name: amy2 Funciton: Alpha-amylase (EC 3.2.1.1) |
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omp(Mal)
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Predicted maltose-specific TonB-dependent receptor
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trpH
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Tryptophan halogenase
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susA
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Neopullulanase (EC 3.2.1.135)
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amy2
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Alpha-amylase (EC 3.2.1.1)
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Position: -294
Score: 5.6 Sequence: GATGAATACGTATGTAGT
Locus tag: Sden_2003
Name: malT Funciton: Predicted maltose transporter MalT
Locus tag: Sden_2004
Name: cga Funciton: Glucoamylase (EC 3.2.1.3) |
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malT
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Predicted maltose transporter MalT
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cga
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Glucoamylase (EC 3.2.1.3)
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Position: -112
Score: 6 Sequence: TATGCATACGTATTCATA
Locus tag: Sden_1800
Name: amyA Funciton: Cytoplasmic alpha-amylase (EC 3.2.1.1) |
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amyA
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Cytoplasmic alpha-amylase (EC 3.2.1.1)
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Position: -100
Score: 5.7 Sequence: CCTGAATACGTATGTAGT
Locus tag: Sden_2002
Name: susB Funciton: Alpha-glucosidase (EC 3.2.1.20) |
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susB
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Alpha-glucosidase (EC 3.2.1.20)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |