Regulon of MalR in Shewanella denitrificans OS217

Properties
Regulator type:	Transcription factor
TF locus tag:	Sden_1820
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Maltodextrin utilization
Effector:	Maltose
Regulog:	MalR - Shewanellaceae
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 67 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LacI
By effector - Maltose
By pathway - Maltodextrin utilization

Regulated operons
	Locus Tag	Name	Function
Position: -292 Score: 6.1 Sequence: TATGCATACGTATTCAAT Position: -143 Score: 6.2 Sequence: TTTGCATACGTATGCAGT Locus tag: Sden_2028 Name: malZ Funciton: Maltodextrin glucosidase (EC 3.2.1.20) Locus tag: Sden_2027 Name: glcP Funciton: Predicted glucose transporter in maltodextrin utilization gene cluster
	Sden_2028	malZ	Maltodextrin glucosidase (EC 3.2.1.20)
	Sden_2027	glcP	Predicted glucose transporter in maltodextrin utilization gene cluster
Position: -354 Score: 6.2 Sequence: ACTGCATACGTATGCAAA Position: -205 Score: 6.1 Sequence: ATTGAATACGTATGCATA Locus tag: Sden_2029 Name: omp(Mal) Funciton: Predicted maltose-specific TonB-dependent receptor Locus tag: Sden_2030 Name: trpH Funciton: Tryptophan halogenase Locus tag: Sden_2031 Name: susA Funciton: Neopullulanase (EC 3.2.1.135) Locus tag: Sden_2032 Name: amy2 Funciton: Alpha-amylase (EC 3.2.1.1)
	Sden_2029	omp(Mal)	Predicted maltose-specific TonB-dependent receptor
	Sden_2030	trpH	Tryptophan halogenase
	Sden_2031	susA	Neopullulanase (EC 3.2.1.135)
	Sden_2032	amy2	Alpha-amylase (EC 3.2.1.1)
Position: -294 Score: 5.6 Sequence: GATGAATACGTATGTAGT Locus tag: Sden_2003 Name: malT Funciton: Predicted maltose transporter MalT Locus tag: Sden_2004 Name: cga Funciton: Glucoamylase (EC 3.2.1.3)
	Sden_2003	malT	Predicted maltose transporter MalT
	Sden_2004	cga	Glucoamylase (EC 3.2.1.3)
Position: -112 Score: 6 Sequence: TATGCATACGTATTCATA Locus tag: Sden_1800 Name: amyA Funciton: Cytoplasmic alpha-amylase (EC 3.2.1.1)
	Sden_1800	amyA	Cytoplasmic alpha-amylase (EC 3.2.1.1)
Position: -100 Score: 5.7 Sequence: CCTGAATACGTATGTAGT Locus tag: Sden_2002 Name: susB Funciton: Alpha-glucosidase (EC 3.2.1.20)
	Sden_2002	susB	Alpha-glucosidase (EC 3.2.1.20)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD