Regulon of MetJ in Pseudoalteromonas atlantica T6c
| Regulator type: | Transcription factor |
| TF locus tag: | Patl_3956 |
| Regulator family: | MetJ |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism; Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | MetJ - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - MetJ
- By TF family - MetJ
- By effector - S-adenosylmethionine
- By pathway - Methionine metabolism
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -27
Score: 7.8 Sequence: AGACGTCT-(0)-AAACGTCC
Locus tag: Patl_1376
Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family |
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metT
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Methionine transporter MetT, NhaC antiporter family
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Position: -80
Score: 6.6 Sequence: AGACTGCT-(0)-AAACATCT
Position: -36
Score: 7.8 Sequence: AGACGTCT-(0)-AAACGTCC
Locus tag: Patl_3955
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -262
Score: 7.2 Sequence: AGACGTCT-(0)-AGACGGTT
Position: -247
Score: 6.4 Sequence: TGACATAT-(0)-AGACGTCT
Position: -239
Score: 6.3 Sequence: AGACGTCT-(0)-ATACGGCA
Locus tag: Patl_3580
Name: thrA Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: Patl_3579
Name: thrB Funciton: Homoserine kinase (EC 2.7.1.39)
Locus tag: Patl_3578
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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thrA
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Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
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thrB
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Homoserine kinase (EC 2.7.1.39)
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thrC
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Threonine synthase (EC 4.2.3.1)
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Position: -45
Score: 7.3 Sequence: AGACGTCC-(0)-AGATGTCT
Locus tag: Patl_1156
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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serA
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D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
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Position: -100
Score: 7.1 Sequence: AGCCGTTT-(0)-GGACGTCT
Locus tag: Patl_3331
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Position: -126
Score: 7.5 Sequence: GGACGTTT-(0)-AGACGTCT
Position: -90
Score: 6.2 Sequence: AGCCGTCA-(0)-AGATGTTT
Locus tag: Patl_3956
Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ |
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metJ
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S-adenosylmethionine-responsive transcriptional repressor MetJ
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Position: -88
Score: 6.2 Sequence: TTACGTTT-(0)-AGACGTCT
Position: -80
Score: 6.6 Sequence: AGACGTCT-(0)-AGACGTAA
Locus tag: Patl_3021
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |