Regulon of IscR in Shewanella sp MR-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewmr4_1738
Regulator family:	Rrf2
Regulation mode:	repressor
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 93 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -64 Score: 5.8 Sequence: ATACTTGAACAAAATAGTCAGGTAA Locus tag: Shewmr4_2889 Name: erpA Funciton: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
	Shewmr4_2889	erpA	ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
Position: -46 Score: 5 Sequence: AATTCTTACTAAAACACTCAGGTAT Locus tag: Shewmr4_3804 Name: nfuA Funciton: NfuA Fe-S protein maturation
	Shewmr4_3804	nfuA	NfuA Fe-S protein maturation
Position: -90 Score: 5.2 Sequence: ATGCCCGACTAATTTAGTCAGGATT Locus tag: Shewmr4_0398 Name: dnrN Funciton: Nitric oxide-dependent regulator DnrN or NorA
	Shewmr4_0398	dnrN	Nitric oxide-dependent regulator DnrN or NorA
Position: -90 Score: 5.6 Sequence: ATACTTGAGTATTTTACTAGGGTTT Position: -65 Score: 6.4 Sequence: ATACTTGACTGAATTACTCGGGTAT Locus tag: Shewmr4_1738 Name: iscR Funciton: Iron-sulfur cluster regulator IscR Locus tag: Shewmr4_1739 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily Locus tag: Shewmr4_1740 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU Locus tag: Shewmr4_1741 Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly Locus tag: Shewmr4_1742 Name: hscB Funciton: Chaperone protein HscB Locus tag: Shewmr4_1743 Name: hscA Funciton: Chaperone protein HscA Locus tag: Shewmr4_1744 Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system
	Shewmr4_1738	iscR	Iron-sulfur cluster regulator IscR
	Shewmr4_1739	iscS	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
	Shewmr4_1740	iscU	Iron-sulfur cluster assembly scaffold protein IscU
	Shewmr4_1741	iscA	Iron binding protein IscA for iron-sulfur cluster assembly
	Shewmr4_1742	hscB	Chaperone protein HscB
	Shewmr4_1743	hscA	Chaperone protein HscA
	Shewmr4_1744	fdx	ferredoxin, 2Fe-2S type, ISC system
Position: -29 Score: 4.4 Sequence: TTATCCGAGTGACAGACTAAGGTAT Locus tag: Shewmr4_3649 Name: ygbA Funciton: hypothetical protein involved in nitrosative stress
	Shewmr4_3649	ygbA	hypothetical protein involved in nitrosative stress

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD