Regulon of IolR in Rhodococcus erythropolis PR4
| Regulator type: | Transcription factor |
| TF locus tag: | RER_20220 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Inositol utilization |
| Effector: | |
| Regulog: | IolR - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - GntR/Others
- By pathway - Inositol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -107
Score: 5.2 Sequence: ATAATGTCCAGACAAACT
Position: -8
Score: 3.5 Sequence: AGTCAGTCTTGACAAGCA
Locus tag: RER_20210
Name: iolC Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
Locus tag: RER_20200
Name: iolJ Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
Locus tag: RER_20190
Name: iolB Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Locus tag: RER_20180
Name: iolD Funciton: Epi-inositol hydrolase (EC 3.7.1.-) |
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iolC
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5-keto-2-deoxygluconokinase (EC 2.7.1.92)
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iolJ
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
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iolB
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5-deoxy-glucuronate isomerase (EC 5.3.1.-)
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iolD
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Epi-inositol hydrolase (EC 3.7.1.-)
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Position: -134
Score: 3.5 Sequence: TGCTTGTCAAGACTGACT
Position: -35
Score: 5.2 Sequence: AGTTTGTCTGGACATTAT
Locus tag: RER_20220
Name: iolR Funciton: Inositol utilization transcriptional regulator, GntR family
Locus tag: RER_20230
Name: iolG3 Funciton: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
Locus tag: RER_20240
Name: iolP Funciton: major facilitator family sugar permease |
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iolR
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Inositol utilization transcriptional regulator, GntR family
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iolG3
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Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
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iolP
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major facilitator family sugar permease
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Position: -112
Score: 5 Sequence: CTAATGTCAGAACAAACT
Locus tag: RER_20340
Name: iolTA Funciton: Inositol ABC transport system sugar-binding protein
Locus tag: RER_20350
Name: iolTB Funciton: Inositol ABC transport system permease protein
Locus tag: RER_20360
Name: iolTC Funciton: Inositol ABC transport system ATP-binding protein |
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iolTA
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Inositol ABC transport system sugar-binding protein
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iolTB
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Inositol ABC transport system permease protein
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iolTC
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Inositol ABC transport system ATP-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |