Regulon of HmgQ in Shewanella halifaxensis HAW-EB4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shal_2408
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Tyrosine degradation
Effector:	4-hydroxyphenylpyruvate
Regulog:	HmgQ - Shewanellaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - 4-hydroxyphenylpyruvate
By pathway - Tyrosine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -124 Score: 5.4 Sequence: ATCTAAAAATTCGAT Position: -42 Score: 5.1 Sequence: ATCAATTAAATAGAT Locus tag: Shal_2409 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: Shal_2410 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	Shal_2409	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	Shal_2410	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Position: -46 Score: 5.4 Sequence: ATCGAATTTTTAGAT Locus tag: Shal_2408 Name: hmgQ Funciton: Tyrosine degradation transcriptional regulator, LysR family
	Shal_2408	hmgQ	Tyrosine degradation transcriptional regulator, LysR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD