Regulon of HmgQ in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_2153
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Tyrosine degradation
Effector:	4-hydroxyphenylpyruvate
Regulog:	HmgQ - Shewanellaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - 4-hydroxyphenylpyruvate
By pathway - Tyrosine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -123 Score: 5.8 Sequence: ATCTAAAATTTAGAT Locus tag: Shew_2154 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: Shew_2155 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	Shew_2154	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	Shew_2155	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
Position: -46 Score: 5.8 Sequence: ATCTAAATTTTAGAT Locus tag: Shew_2153 Name: hmgQ Funciton: Tyrosine degradation transcriptional regulator, LysR family
	Shew_2153	hmgQ	Tyrosine degradation transcriptional regulator, LysR family

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD