Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HmgQ in Shewanella amazonensis SB2B

Properties
Regulator type: Transcription factor
TF locus tag: Sama_1570
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Tyrosine degradation
Effector: 4-hydroxyphenylpyruvate
Regulog: HmgQ - Shewanellaceae
Statistics of regulated genes:
- Genes 3
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 33 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -66
Score: 5.8
Sequence: ATCTAAAAATTAGAT
Locus tag: Sama_1570
Name: hmgQ
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgQ
Tyrosine degradation transcriptional regulator, LysR family

Position: -140
Score: 5.8
Sequence: ATCTAATTTTTAGAT
Locus tag: Sama_1569
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Locus tag: Sama_1568
Name: hpd
Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
hmgA
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
hpd
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD