Regulon of HmgQ in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_1570
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Tyrosine degradation
Effector:	4-hydroxyphenylpyruvate
Regulog:	HmgQ - Shewanellaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - 4-hydroxyphenylpyruvate
By pathway - Tyrosine degradation

Regulated operons
	Locus Tag	Name	Function
Position: -66 Score: 5.8 Sequence: ATCTAAAAATTAGAT Locus tag: Sama_1570 Name: hmgQ Funciton: Tyrosine degradation transcriptional regulator, LysR family
	Sama_1570	hmgQ	Tyrosine degradation transcriptional regulator, LysR family
Position: -140 Score: 5.8 Sequence: ATCTAATTTTTAGAT Locus tag: Sama_1569 Name: hmgA Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Locus tag: Sama_1568 Name: hpd Funciton: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
	Sama_1569	hmgA	Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
	Sama_1568	hpd	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD