Regulon of GcvA in Shewanella denitrificans OS217

Properties
Regulator type:	Transcription factor
TF locus tag:	Sden_2565
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Glycine metabolism
Effector:	Glycine
Regulog:	GcvA - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 108 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Glycine
By pathway - Glycine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -208 Score: 5.2 Sequence: ATAAGAAAAACTAAT Locus tag: Sden_1946 Name: sdaA Funciton: L-serine dehydratase 1 (EC 4.3.1.17)
	Sden_1946	sdaA	L-serine dehydratase 1 (EC 4.3.1.17)
Position: -142 Score: 5.6 Sequence: ATTAGTAAAACTAAT Locus tag: Sden_0833 Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Locus tag: Sden_0834 Name: gcvH Funciton: Glycine cleavage system H protein Locus tag: Sden_0835 Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
	Sden_0833	gcvT	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
	Sden_0834	gcvH	Glycine cleavage system H protein
	Sden_0835	gcvP	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Position: -54 Score: 5.2 Sequence: ATTAGAAAAACTTAT Locus tag: Sden_2565 Name: gcvA Funciton: Glycine cleavage system transcriptional activator GcvA Locus tag: Sden_2564 Name: null Funciton: Predicted hydrolase of the alpha/beta-hydrolase fold
	Sden_2565	gcvA	Glycine cleavage system transcriptional activator GcvA
	Sden_2564		Predicted hydrolase of the alpha/beta-hydrolase fold
Position: -140 Score: 5.7 Sequence: ATTAGAATTTCTAAT Locus tag: Sden_3615 Name: kbl Funciton: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Locus tag: Sden_3616 Name: tdh Funciton: L-threonine 3-dehydrogenase (EC 1.1.1.103)
	Sden_3615	kbl	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)
	Sden_3616	tdh	L-threonine 3-dehydrogenase (EC 1.1.1.103)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD