Regulon of GcvA in Shewanella sp ANA-3

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewana3_2894
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Glycine metabolism
Effector:	Glycine
Regulog:	GcvA - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 108 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Glycine
By pathway - Glycine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -109 Score: 5.6 Sequence: ATTAGTATAACTAAT Locus tag: Shewana3_0651 Name: SO3987 Funciton: hypothetical protein
	Shewana3_0651	SO3987	hypothetical protein
Position: -99 Score: 4.8 Sequence: ATGAAATATTCTAAT Position: -77 Score: 4.2 Sequence: TTTAAATAATCTCAT Locus tag: Shewana3_1204 Name: SO3342 Funciton: putative membrane protein
	Shewana3_1204	SO3342	putative membrane protein
Position: -255 Score: 5.2 Sequence: ATTAGCAAAACTAAT Locus tag: Shewana3_2536 Name: SO2753 Funciton: Prolyl endopeptidase (EC 3.4.21.26)
	Shewana3_2536	SO2753	Prolyl endopeptidase (EC 3.4.21.26)
Position: -199 Score: 4.4 Sequence: ATCAAAAAAACTAAT Locus tag: Shewana3_2295 Name: sdaA Funciton: L-serine dehydratase 1 (EC 4.3.1.17)
	Shewana3_2295	sdaA	L-serine dehydratase 1 (EC 4.3.1.17)
Position: -296 Score: 5.5 Sequence: ATGAGAAAATCTAAT Locus tag: Shewana3_3501 Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Locus tag: Shewana3_3500 Name: gcvH Funciton: Glycine cleavage system H protein Locus tag: Shewana3_3499 Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
	Shewana3_3501	gcvT	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
	Shewana3_3500	gcvH	Glycine cleavage system H protein
	Shewana3_3499	gcvP	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Position: -38 Score: 5.6 Sequence: ATTAGAAAAACTAAT Locus tag: Shewana3_2894 Name: gcvA Funciton: Glycine cleavage system transcriptional activator GcvA Locus tag: Shewana3_2893 Name: SO1534 Funciton: Predicted hydrolase of the alpha/beta-hydrolase fold
	Shewana3_2894	gcvA	Glycine cleavage system transcriptional activator GcvA
	Shewana3_2893	SO1534	Predicted hydrolase of the alpha/beta-hydrolase fold
Position: -148 Score: 5 Sequence: ATTAGTTTTTATAAT Locus tag: Shewana3_4104 Name: kbl Funciton: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Locus tag: Shewana3_4105 Name: tdh Funciton: L-threonine 3-dehydrogenase (EC 1.1.1.103)
	Shewana3_4104	kbl	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)
	Shewana3_4105	tdh	L-threonine 3-dehydrogenase (EC 1.1.1.103)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD