Regulon of GcvA in Shewanella sp W3-18-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Sputw3181_2824
Regulator family:	LysR
Regulation mode:	activator (repressor)
Biological process:	Glycine metabolism
Effector:	Glycine
Regulog:	GcvA - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 108 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LysR
By effector - Glycine
By pathway - Glycine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -109 Score: 5.6 Sequence: ATTAGTATAACTAAT Locus tag: Sputw3181_3492 Name: SO3987 Funciton: hypothetical protein
	Sputw3181_3492	SO3987	hypothetical protein
Position: -85 Score: 5 Sequence: ATTATTTTTTCTAAT Locus tag: Sputw3181_1334 Name: SO3342 Funciton: putative membrane protein
	Sputw3181_1334	SO3342	putative membrane protein
Position: -255 Score: 5.3 Sequence: ATTAGCAAATCTAAT Locus tag: Sputw3181_2420 Name: SO2753 Funciton: Prolyl endopeptidase (EC 3.4.21.26)
	Sputw3181_2420	SO2753	Prolyl endopeptidase (EC 3.4.21.26)
Position: -202 Score: 4.4 Sequence: ATCAAAAAAACTAAT Locus tag: Sputw3181_1837 Name: sdaA Funciton: L-serine dehydratase 1 (EC 4.3.1.17)
	Sputw3181_1837	sdaA	L-serine dehydratase 1 (EC 4.3.1.17)
Position: -152 Score: 5.5 Sequence: ATGAGAAAATCTAAT Locus tag: Sputw3181_0730 Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Locus tag: Sputw3181_0731 Name: gcvH Funciton: Glycine cleavage system H protein Locus tag: Sputw3181_0732 Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
	Sputw3181_0730	gcvT	Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
	Sputw3181_0731	gcvH	Glycine cleavage system H protein
	Sputw3181_0732	gcvP	Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Position: -38 Score: 5.6 Sequence: ATTAGAAAAACTAAT Locus tag: Sputw3181_2824 Name: gcvA Funciton: Glycine cleavage system transcriptional activator GcvA Locus tag: Sputw3181_2823 Name: SO1534 Funciton: Predicted hydrolase of the alpha/beta-hydrolase fold
	Sputw3181_2824	gcvA	Glycine cleavage system transcriptional activator GcvA
	Sputw3181_2823	SO1534	Predicted hydrolase of the alpha/beta-hydrolase fold
Position: -148 Score: 5 Sequence: ATTAGTTTTTATAAT Locus tag: Sputw3181_0050 Name: kbl Funciton: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) Locus tag: Sputw3181_0049 Name: tdh Funciton: L-threonine 3-dehydrogenase (EC 1.1.1.103)
	Sputw3181_0050	kbl	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)
	Sputw3181_0049	tdh	L-threonine 3-dehydrogenase (EC 1.1.1.103)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD