Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of VSAK1_25095 in Photobacterium profundum SS9

Properties
Regulator type: Transcription factor
TF locus tag: PBPRA2242
Regulator family: GntR/Others
Regulation mode:
Biological process: Xanthine utilization; Allantoin utilization
Effector:
Regulog: VSAK1_25095 - Vibrionales
Statistics of regulated genes:
- Genes 13
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -91
Score: 3.7
Sequence: CGGTATACAA
Locus tag: PBPRA2259
Name: PA1513
Funciton: conserved hypothetical membrane protein, paralogue of Y20848
PBPRA2259
PA1513
conserved hypothetical membrane protein, paralogue of Y20848
Position: -323
Score: 4.1
Sequence: ATGTACACAA
Position: -154
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PBPRA2263
Name: PA1517
Funciton: putative uricase
Locus tag: PBPRA2262
Name: uraO
Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: PBPRA2261
Name: alc
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: PBPRA2260
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
PBPRA2263
PA1517
putative uricase
PBPRA2262
uraO
Urate oxidase (EC 1.7.3.3)
PBPRA2261
alc
Allantoicase (EC 3.5.3.4)
PBPRA2260
allA
Ureidoglycolate hydrolase (EC 3.5.3.19)
Position: -100
Score: 4.8
Sequence: TTGTACACAA
Locus tag: PBPRA2242
Name: VSAK1_25095
Funciton: Transcriptional regulator, GntR family
PBPRA2242
VSAK1_25095
Transcriptional regulator, GntR family
Position: -234
Score: 4.7
Sequence: TTGTATACAA
Position: -65
Score: 4.1
Sequence: TTGTGTACAT
Locus tag: PBPRA2264
Name: PA1518
Funciton: 5-hydroxyisourate hydrolase
PBPRA2264
PA1518
5-hydroxyisourate hydrolase
Position: -231
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PBPRA2265
Name: PA1519
Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein
PBPRA2265
PA1519
Xanthine/uracil/thiamine/ascorbate permease family protein
Position: -284
Score: 4
Sequence: TTGTATACAT
Position: -29
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PBPRA2275
Name: VSAK1_24900
Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: PBPRA2274
Name: VSAK1_24905
Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: PBPRA2273
Name: VSAK1_24910
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
PBPRA2275
VSAK1_24900
Glyoxylate carboligase (EC 4.1.1.47)
PBPRA2274
VSAK1_24905
Hydroxypyruvate isomerase (EC 5.3.1.22)
PBPRA2273
VSAK1_24910
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Position: -301
Score: 4.7
Sequence: TTGTATACAA
Position: -46
Score: 4
Sequence: ATGTATACAA
Locus tag: PBPRA2276
Name: VSAK1_24895
Funciton: malate synthase
Locus tag: PBPRA2277
Name: glcG
Funciton: GLCG PROTEIN
PBPRA2276
VSAK1_24895
malate synthase
PBPRA2277
glcG
GLCG PROTEIN
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