Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of VSAK1_25095 in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_25095
Regulator family: GntR/Others
Regulation mode:
Biological process: Xanthine utilization; Allantoin utilization
Effector:
Regulog: VSAK1_25095 - Vibrionales
Statistics of regulated genes:
- Genes 15
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -290
Score: 4.7
Sequence: TTGTATACAA
Position: -99
Score: 4.1
Sequence: TTGTGTACAT
Position: -56
Score: 4.5
Sequence: TTGTATACAG
Locus tag: VSAK1_24955
Name: PA1518
Funciton: 5-hydroxyisourate hydrolase
VSAK1_24955
PA1518
5-hydroxyisourate hydrolase
Position: -294
Score: 4.7
Sequence: TTGTATACAA
Position: -272
Score: 4
Sequence: TTGTGTACTA
Position: -42
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24895
Name: VSAK1_24895
Funciton: malate synthase
Locus tag: VSAK1_24890
Name: glcG
Funciton: GLCG PROTEIN
VSAK1_24895
VSAK1_24895
malate synthase
VSAK1_24890
glcG
GLCG PROTEIN
Position: -313
Score: 4.5
Sequence: CTGTATACAA
Position: -270
Score: 4.1
Sequence: ATGTACACAA
Position: -79
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24960
Name: PA1517
Funciton: putative uricase
Locus tag: VSAK1_24965
Name: uraO
Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: VSAK1_24970
Name: alc
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: VSAK1_24975
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: VSAK1_24980
Name: PA1513
Funciton: conserved hypothetical membrane protein, paralogue of Y20848
VSAK1_24960
PA1517
putative uricase
VSAK1_24965
uraO
Urate oxidase (EC 1.7.3.3)
VSAK1_24970
alc
Allantoicase (EC 3.5.3.4)
VSAK1_24975
allA
Ureidoglycolate hydrolase (EC 3.5.3.19)
VSAK1_24980
PA1513
conserved hypothetical membrane protein, paralogue of Y20848
Position: -64
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_25095
Name: VSAK1_25095
Funciton: Transcriptional regulator, GntR family
VSAK1_25095
VSAK1_25095
Transcriptional regulator, GntR family
Position: -21
Score: 3.8
Sequence: TTGTGTAAAG
Locus tag: VSAK1_24950
Name: PA1519
Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein
Locus tag: VSAK1_24945
Name: VSAK1_24945
Funciton: Xanthine/uracil permease
Locus tag: VSAK1_24940
Name: VSAK1_24940
Funciton: Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
VSAK1_24950
PA1519
Xanthine/uracil/thiamine/ascorbate permease family protein
VSAK1_24945
VSAK1_24945
Xanthine/uracil permease
VSAK1_24940
VSAK1_24940
Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
Position: -280
Score: 4.7
Sequence: TTGTATACAA
Position: -50
Score: 4
Sequence: TAGTACACAA
Position: -28
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24900
Name: VSAK1_24900
Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: VSAK1_24905
Name: VSAK1_24905
Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: VSAK1_24910
Name: VSAK1_24910
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
VSAK1_24900
VSAK1_24900
Glyoxylate carboligase (EC 4.1.1.47)
VSAK1_24905
VSAK1_24905
Hydroxypyruvate isomerase (EC 5.3.1.22)
VSAK1_24910
VSAK1_24910
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise