Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of VSAK1_25095 in Vibrio shilonii AK1

Properties
Regulator type: Transcription factor
TF locus tag: VSAK1_25095
Regulator family: GntR/Others
Regulation mode:
Biological process: Xanthine utilization; Allantoin utilization
Effector:
Regulog: VSAK1_25095 - Vibrionales
Statistics of regulated genes:
- Genes 15
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 25 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -290
Score: 4.7
Sequence: TTGTATACAA
Position: -99
Score: 4.1
Sequence: TTGTGTACAT
Position: -56
Score: 4.5
Sequence: TTGTATACAG
Locus tag: VSAK1_24955
Name: PA1518
Funciton: 5-hydroxyisourate hydrolase
PA1518
5-hydroxyisourate hydrolase

Position: -294
Score: 4.7
Sequence: TTGTATACAA
Position: -272
Score: 4
Sequence: TTGTGTACTA
Position: -42
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24895
Name: VSAK1_24895
Funciton: malate synthase
Locus tag: VSAK1_24890
Name: glcG
Funciton: GLCG PROTEIN
VSAK1_24895
malate synthase
glcG
GLCG PROTEIN

Position: -313
Score: 4.5
Sequence: CTGTATACAA
Position: -270
Score: 4.1
Sequence: ATGTACACAA
Position: -79
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24960
Name: PA1517
Funciton: putative uricase
Locus tag: VSAK1_24965
Name: uraO
Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: VSAK1_24970
Name: alc
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: VSAK1_24975
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: VSAK1_24980
Name: PA1513
Funciton: conserved hypothetical membrane protein, paralogue of Y20848
PA1517
putative uricase
uraO
Urate oxidase (EC 1.7.3.3)
alc
Allantoicase (EC 3.5.3.4)
allA
Ureidoglycolate hydrolase (EC 3.5.3.19)
PA1513
conserved hypothetical membrane protein, paralogue of Y20848

Position: -64
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_25095
Name: VSAK1_25095
Funciton: Transcriptional regulator, GntR family
VSAK1_25095
Transcriptional regulator, GntR family

Position: -21
Score: 3.8
Sequence: TTGTGTAAAG
Locus tag: VSAK1_24950
Name: PA1519
Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein
Locus tag: VSAK1_24945
Name: VSAK1_24945
Funciton: Xanthine/uracil permease
Locus tag: VSAK1_24940
Name: VSAK1_24940
Funciton: Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)
PA1519
Xanthine/uracil/thiamine/ascorbate permease family protein
VSAK1_24945
Xanthine/uracil permease
VSAK1_24940
Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)

Position: -280
Score: 4.7
Sequence: TTGTATACAA
Position: -50
Score: 4
Sequence: TAGTACACAA
Position: -28
Score: 4.7
Sequence: TTGTATACAA
Locus tag: VSAK1_24900
Name: VSAK1_24900
Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: VSAK1_24905
Name: VSAK1_24905
Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: VSAK1_24910
Name: VSAK1_24910
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
VSAK1_24900
Glyoxylate carboligase (EC 4.1.1.47)
VSAK1_24905
Hydroxypyruvate isomerase (EC 5.3.1.22)
VSAK1_24910
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD