Regulon of IdnR in Xanthobacter autotrophicus Py2
| Regulator type: | Transcription factor |
| TF locus tag: | Xaut_2434 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Idonate utilization |
| Effector: | L-idonate |
| Regulog: | IdnR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By effector - L-idonate
- By pathway - Idonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -81
Score: 5.7 Sequence: TCATGATATCGGTAACATGA
Locus tag: Xaut_2436
Name: idnD Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: Xaut_2435
Name: SSF54909 Funciton: Dimeric alpha-beta barrel
Locus tag: Xaut_2434
Name: idnR Funciton: Predicted transcriptional regulator of L-idonate utilization, LacI family
Locus tag: Xaut_2433
Name: gnd Funciton: 6-phosphogluconate dehydrogenase EC=1.1.1.44 |
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idnD
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L-idonate 5-dehydrogenase (EC 1.1.1.264)
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SSF54909
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Dimeric alpha-beta barrel
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idnR
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Predicted transcriptional regulator of L-idonate utilization, LacI family
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gnd
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6-phosphogluconate dehydrogenase EC=1.1.1.44
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Position: -83
Score: 5.7 Sequence: TCATGTTACCGATATCATGA
Locus tag: Xaut_2437
Name: idnO Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: Xaut_2438
Name: Atu4687 Funciton: putative ABC transporter, substrate-binding component
Locus tag: Xaut_2439
Name: Atu4688 Funciton: putative ABC transporter, membrane spanning protein
Locus tag: Xaut_2440
Name: Atu4689 Funciton: putative ABC transporter, membrane spanning protein
Locus tag: Xaut_2441
Name: Atu4690 Funciton: putative ABC transporter, ATPase protein |
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idnO
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Gluconate 5-dehydrogenase (EC 1.1.1.69)
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Atu4687
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putative ABC transporter, substrate-binding component
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Atu4688
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putative ABC transporter, membrane spanning protein
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Atu4689
|
putative ABC transporter, membrane spanning protein
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Atu4690
|
putative ABC transporter, ATPase protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |