Profile of regulator IdnR in Rhizobiales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Idonate utilization |
| Effector: |
L-idonate |
| Regulog: |
IdnR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu4687 |
Atu4687 |
-83 |
6.4 |
AAATGTTATCGAGAACATTT |
|
Atu4687 |
Atu4687 |
-245 |
5.7 |
CAATGATACCGATAACATGC |
|
Atu4086 |
idnO |
-58 |
6.4 |
GAATGTTATCGGTAACATAT |
|
Atu4686 |
SSF54909 |
-70 |
5.7 |
GCATGTTATCGGTATCATTG |
|
Atu4686 |
SSF54909 |
-232 |
6.4 |
AAATGTTCTCGATAACATTT |
|
Atu4087 |
idnD |
-177 |
6.4 |
ATATGTTACCGATAACATTC |
|
Azorhizobium caulinodans ORS 571
|
|
AZC_2613 |
idnD |
-62 |
6 |
GCATGTTATCGGTAACAAAA |
|
AZC_2614 |
idnO |
-96 |
6 |
TTTTGTTACCGATAACATGC |
|
Bradyrhizobium sp. BTAi1
|
|
BBta_0778 |
idnR |
-114 |
5.7 |
GATTGTTATCGATATCACTG |
|
BBta_0777 |
idnO |
-58 |
6 |
TCCTGTTATCGATAACATAG |
|
Rhizobium etli CFN 42
|
|
RHE_PC00143 |
COG1063 |
-98 |
6.8 |
ATATGTTATCGATAACATAA |
|
RHE_PC00144 |
idnO |
-105 |
6.8 |
TTATGTTATCGATAACATAT |
|
RHE_PC00141 |
idnR |
-226 |
6.1 |
ATTTGTTATCGATATCATCC |
|
RHE_PC00141 |
idnR |
-131 |
4.9 |
CGATGATAGCGATAACTTTA |
|
RHE_PC00140 |
gnl |
-37 |
6.1 |
GGATGATATCGATAACAAAT |
|
RHE_PC00140 |
gnl |
-132 |
4.9 |
TAAAGTTATCGCTATCATCG |
|
RHE_PC00147 |
null |
-57 |
6.8 |
GAATGTTATCGATAACATAT |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
pRL100390 |
COG1063 |
-68 |
6.8 |
ATATGTTATCGATAACATAA |
|
pRL100391 |
idnO |
-104 |
6.8 |
TTATGTTATCGATAACATAT |
|
pRL100388 |
idnR |
-268 |
6.1 |
AATTGTTATCGATATCATCT |
|
pRL100388 |
idnR |
-132 |
4.9 |
CGATGATAGCGATAACTTTA |
|
pRL100387 |
gnl |
-177 |
4.9 |
TAAAGTTATCGCTATCATCG |
|
pRL100387 |
gnl |
-41 |
6.1 |
AGATGATATCGATAACAATT |
|
pRL100394 |
null |
-55 |
6.8 |
AAATGTTATCGATAACATAC |
|
Rhizobium sp. NGR234
|
|
NGR_b22270 |
idnO |
-48 |
6.7 |
GAATGTTATCGATAACATAA |
|
NGR_b22260 |
COG1063 |
-21 |
6.7 |
TTATGTTATCGATAACATTC |
|
NGR_b22380 |
idnR |
-67 |
6.5 |
AGATGTTATCGATAACAAAT |
|
NGR_b22380 |
idnR |
-88 |
4.8 |
GAAGGTTATCGTTAACTTAG |
|
NGR_b22410 |
null |
-54 |
6.5 |
TCATGTTATCGATAACATAA |
|
NGR_b22370 |
Atu4687 |
-217 |
6.5 |
ATTTGTTATCGATAACATCT |
|
Xanthobacter autotrophicus Py2
|
|
Xaut_2437 |
idnO |
-83 |
5.7 |
TCATGTTACCGATATCATGA |
|
Xaut_2436 |
idnD |
-81 |
5.7 |
TCATGATATCGGTAACATGA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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