Regulon of IdnR in Rhizobium etli CFN 42
| Regulator type: | Transcription factor |
| TF locus tag: | RHE_PC00141 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Idonate utilization |
| Effector: | L-idonate |
| Regulog: | IdnR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By effector - L-idonate
- By pathway - Idonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -132
Score: 4.9 Sequence: TAAAGTTATCGCTATCATCG
Position: -37
Score: 6.1 Sequence: GGATGATATCGATAACAAAT
Locus tag: RHE_PC00140
Name: gnl Funciton: Gluconolactonase (EC 3.1.1.17) |
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gnl
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Gluconolactonase (EC 3.1.1.17)
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Position: -98
Score: 6.8 Sequence: ATATGTTATCGATAACATAA
Locus tag: RHE_PC00143
Name: COG1063 Funciton: Threonine dehydrogenase and related Zn-dependent dehydrogenases
Locus tag: RHE_PC00142
Name: idnD Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264) |
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COG1063
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Threonine dehydrogenase and related Zn-dependent dehydrogenases
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idnD
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L-idonate 5-dehydrogenase (EC 1.1.1.264)
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Position: -57
Score: 6.8 Sequence: GAATGTTATCGATAACATAT
Locus tag: RHE_PC00147
Name: null Funciton: Sugar ABC transporter, ATP-binding protein
Locus tag: RHE_PC00148
Name: null Funciton: Sugar ABC transporter, inner membrane protein
Locus tag: RHE_PC00149
Name: null Funciton: Sugar ABC transporter, substrate-binding protein |
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Sugar ABC transporter, ATP-binding protein
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Sugar ABC transporter, inner membrane protein
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Sugar ABC transporter, substrate-binding protein
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Position: -105
Score: 6.8 Sequence: TTATGTTATCGATAACATAT
Locus tag: RHE_PC00144
Name: idnO Funciton: Gluconate 5-dehydrogenase (EC 1.1.1.69)
Locus tag: RHE_PC00145
Name: idnK Funciton: Gluconokinase (EC 2.7.1.12)
Locus tag: RHE_PC00146
Name: gnd Funciton: 6-phosphogluconate dehydrogenase EC=1.1.1.44 |
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idnO
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Gluconate 5-dehydrogenase (EC 1.1.1.69)
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idnK
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Gluconokinase (EC 2.7.1.12)
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gnd
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6-phosphogluconate dehydrogenase EC=1.1.1.44
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Position: -226
Score: 6.1 Sequence: ATTTGTTATCGATATCATCC
Position: -131
Score: 4.9 Sequence: CGATGATAGCGATAACTTTA
Locus tag: RHE_PC00141
Name: idnR Funciton: Predicted transcriptional regulator of L-idonate utilization, LacI family |
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idnR
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Predicted transcriptional regulator of L-idonate utilization, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |