Regulon of CceR (GapR) in Roseovarius sp. 217
| Regulator type: | Transcription factor |
| TF locus tag: | ROS217_09370 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 6-phosphogluconate |
| Regulog: | CceR (GapR) - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - LacI
- By effector - 6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -46
Score: 4.6 Sequence: GGGCGTTCGCGGTAACAATG
Locus tag: ROS217_09370
Name: cceR Funciton: Transcriptional regulator for central carbohydrate metabolism, LacI family |
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cceR
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Transcriptional regulator for central carbohydrate metabolism, LacI family
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Position: -51
Score: 5.4 Sequence: CGATGTTAGCGTTAACATTG
Locus tag: ROS217_12046
Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pykA
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Pyruvate kinase (EC 2.7.1.40)
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Position: -150
Score: 4.7 Sequence: TTGCGTTAGCGCAATCACCG
Position: -109
Score: 4.9 Sequence: CTAGGTTAACGCTAACATCC
Locus tag: ROS217_23117
Name: gapA Funciton: Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
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gapA
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Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
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Position: -77
Score: 4.8 Sequence: AAGTGATTGCGCTAACTTGG
Locus tag: ROS217_15745
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -197
Score: 4.8 Sequence: GCGCGTTGTCGCTAACATAC
Position: -177
Score: 5.1 Sequence: GTCTGGTTGCGCTAACTTGC
Position: -157
Score: 4.9 Sequence: GCTTGGTTGCGCTAACTGCA
Locus tag: ROS217_04095
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -214
Score: 4.6 Sequence: CCATGATAGCGTTAACGCTT
Locus tag: ROS217_14311
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: ROS217_14316
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: ROS217_14321
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: ROS217_14326
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: ROS217_14331
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
Locus tag: ROS217_14336
Name: atpI Funciton: ATP synthase protein I |
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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atpI
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ATP synthase protein I
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Position: -85
Score: 4.7 Sequence: TTCTGTTAGCGCCACCACGA
Locus tag: ROS217_17772
Name: fba Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13) |
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fba
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Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
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Position: -35
Score: 5.7 Sequence: AATTGTTAGCGCTAACATAT
Locus tag: ROS217_23127
Name: gapB Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) |
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gapB
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Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |