Regulon of CceR (GapR) in Roseovarius nubinhibens ISM

Properties
Regulator type:	Transcription factor
TF locus tag:	ISM_08560
Regulator family:	LacI
Regulation mode:
Biological process:	Central carbohydrate metabolism
Effector:	6-phosphogluconate
Regulog:	CceR (GapR) - Rhodobacterales
Statistics of regulated genes:
- Genes	13
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 177 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - LacI
By effector - 6-phosphogluconate
By pathway - Central carbohydrate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 4.6 Sequence: CACCGTTCGCGATAACATTT Locus tag: ISM_08560 Name: cceR Funciton: Transcriptional regulator for central carbohydrate metabolism, LacI family
	ISM_08560	cceR	Transcriptional regulator for central carbohydrate metabolism, LacI family
Position: -123 Score: 3.6 Sequence: GGCGGTTTGCGGCAAATTAT Locus tag: ISM_03480 Name: tal Funciton: Transaldolase (EC 2.2.1.2)
	ISM_03480	tal	Transaldolase (EC 2.2.1.2)
Position: -82 Score: 5.1 Sequence: TGATGTTAGCGATAACGGTA Locus tag: ISM_02615 Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40)
	ISM_02615	pykA	Pyruvate kinase (EC 2.7.1.40)
Position: -105 Score: 4.6 Sequence: GAAATTTATCGCTAACAAGG Locus tag: ISM_10930 Name: gapA Funciton: Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
	ISM_10930	gapA	Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -174 Score: 5.3 Sequence: CGCTGGTTGCGCTAACGTCC Position: -154 Score: 4.6 Sequence: AATTGGTTGCGCTAACTCAG Locus tag: ISM_13535 Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
	ISM_13535	pckA	Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -302 Score: 4.6 Sequence: TTACGATAGCGGTAACGCCG Locus tag: ISM_11730 Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14) Locus tag: ISM_11735 Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14) Locus tag: ISM_11740 Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14) Locus tag: ISM_11745 Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14) Locus tag: ISM_11750 Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) Locus tag: ISM_11755 Name: atpI Funciton: ATP synthase protein I
	ISM_11730	atpH	ATP synthase delta chain (EC 3.6.3.14)
	ISM_11735	atpA	ATP synthase alpha chain (EC 3.6.3.14)
	ISM_11740	atpG	ATP synthase gamma chain (EC 3.6.3.14)
	ISM_11745	atpD	ATP synthase beta chain (EC 3.6.3.14)
	ISM_11750	atpC	ATP synthase epsilon chain (EC 3.6.3.14)
	ISM_11755	atpI	ATP synthase protein I
Position: -126 Score: 4.1 Sequence: AACCGTTACCGGCATCATCG Position: -85 Score: 5.2 Sequence: TCGTGTTAGCGATAACATAT Locus tag: ISM_16480 Name: eno Funciton: Enolase (EC 4.2.1.11)
	ISM_16480	eno	Enolase (EC 4.2.1.11)
Position: -80 Score: 4.6 Sequence: AGGCGTTAGCGCCACCAAGA Locus tag: ISM_04665 Name: fba Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
	ISM_04665	fba	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CceR (GapR) in Roseovarius nubinhibens ISM

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --