Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CceR (GapR) in Loktanella vestfoldensis SKA53

Properties
Regulator type: Transcription factor
TF locus tag: SKA53_12393
Regulator family: LacI
Regulation mode:
Biological process: Central carbohydrate metabolism
Effector: 6-phosphogluconate
Regulog: CceR (GapR) - Rhodobacterales
Statistics of regulated genes:
- Genes 11
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 177 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -42
Score: 5.3
Sequence: GGGCGTTAGCGCTAACGAAA
Locus tag: SKA53_03186
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: SKA53_03191
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: SKA53_03196
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
SKA53_03186
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
SKA53_03191
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
SKA53_03196
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -58
Score: 5.6
Sequence: CCTTGTTAGCGCTAACACAA
Locus tag: SKA53_05488
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
SKA53_05488
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
Position: -39
Score: 5.4
Sequence: TGCTGTTACCGCTAACGGGC
Locus tag: SKA53_10229
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
SKA53_10229
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -135
Score: 5.1
Sequence: GAATGTTGGCGCAAACATTT
Position: -122
Score: 4.7
Sequence: AACATTTAGCGGTAACAGCA
Position: -93
Score: 5
Sequence: GTCTGTTACCGTTAACACCC
Locus tag: SKA53_02881
Name: gapA
Funciton: Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
SKA53_02881
gapA
Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -125
Score: 5.2
Sequence: ATTTGGTTGCGCTAACATGC
Position: -105
Score: 4.8
Sequence: ATTTGGTTGCGCTAACGTTT
Locus tag: SKA53_13138
Name: pckA
Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
SKA53_13138
pckA
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -40
Score: 5.6
Sequence: CAATGTTAGCGCCAACATTC
Locus tag: SKA53_02871
Name: gapB
Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
SKA53_02871
gapB
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -40
Score: 5.4
Sequence: ATTTGTTATCGCTAACAGCC
Locus tag: SKA53_01436
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
SKA53_01436
scrK
Fructokinase (EC 2.7.1.4)
Position: -38
Score: 5.1
Sequence: CACTGATACCGCTAACATCG
Locus tag: SKA53_03091
Name: eno
Funciton: Enolase (EC 4.2.1.11)
SKA53_03091
eno
Enolase (EC 4.2.1.11)
Position: -104
Score: 5.3
Sequence: CGCCGTTTGCGATAACATCC
Position: -83
Score: 5.1
Sequence: GTCCGTTCGCGCTAACATAT
Locus tag: SKA53_05615
Name: fba
Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
SKA53_05615
fba
Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
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