Regulon of CceR (GapR) in Jannaschia sp. CCS1

Properties
Regulator type:	Transcription factor
TF locus tag:	Jann_0311
Regulator family:	LacI
Regulation mode:
Biological process:	Central carbohydrate metabolism
Effector:	6-phosphogluconate
Regulog:	CceR (GapR) - Rhodobacterales
Statistics of regulated genes:
- Genes	14
- Operons	12
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 177 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - LacI
By effector - 6-phosphogluconate
By pathway - Central carbohydrate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -63 Score: 5.4 Sequence: CCCTGTTACCGCTAACACAC Locus tag: Jann_1695 Name: gapB Funciton: Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
	Jann_1695	gapB	Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -40 Score: 4.8 Sequence: AAAGGTTACCGCTAACACGT Locus tag: Jann_2674 Name: scrK Funciton: Fructokinase (EC 2.7.1.4)
	Jann_2674	scrK	Fructokinase (EC 2.7.1.4)
Position: -71 Score: 5.7 Sequence: TTCCGTTAGCGCTAACATGC Locus tag: Jann_1032 Name: tal Funciton: Transaldolase (EC 2.2.1.2)
	Jann_1032	tal	Transaldolase (EC 2.2.1.2)
Position: -101 Score: 4.1 Sequence: GGGCGTTGGGGCTATCGGCC Locus tag: Jann_0818 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Jann_0818	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -55 Score: 5.8 Sequence: ACATGTTAGCGCTAACATGA Locus tag: Jann_1953 Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
	Jann_1953	edd	Phosphogluconate dehydratase (EC 4.2.1.12)
Position: -37 Score: 5.8 Sequence: CGCTGTTAGCGCTAACGTGA Locus tag: Jann_1969 Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Locus tag: Jann_1970 Name: pgl Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Locus tag: Jann_1971 Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
	Jann_1969	zwf	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
	Jann_1970	pgl	6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
	Jann_1971	pgi	Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -128 Score: 4.9 Sequence: CCGTGTTAGCGCCACCACCC Position: -109 Score: 4.6 Sequence: CGATGTTTGCGCCACCGTTT Position: -97 Score: 5.2 Sequence: CACCGTTTCCGCTAACATGC Locus tag: Jann_1698 Name: gapA Funciton: Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
	Jann_1698	gapA	Gllyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -138 Score: 4.9 Sequence: GTATGGTTGCGCTAACTGTG Locus tag: Jann_0535 Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
	Jann_0535	pckA	Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Position: -80 Score: 5.3 Sequence: GACTGATAGCGCAAACATCG Locus tag: Jann_0447 Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40)
	Jann_0447	pykA	Pyruvate kinase (EC 2.7.1.40)
Position: -179 Score: 5.2 Sequence: GCATGTTAGCGGAAACGGTG Position: -167 Score: 4.6 Sequence: AAACGGTGGCGCAAACATCG Position: -148 Score: 4.9 Sequence: GGGTGGTGGCGCTAACACGG Locus tag: Jann_1699 Name: yedI Funciton: conserved inner membrane protein
	Jann_1699	yedI	conserved inner membrane protein
Position: -80 Score: 4.8 Sequence: GCCTGATAGCGCAACCATGA Locus tag: Jann_1693 Name: fba Funciton: Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
	Jann_1693	fba	Fructose-bisphosphate aldolase class I (EC 4.1.2.13)
Position: -84 Score: 5.4 Sequence: GCCTGTTACCGCTAACGGAA Locus tag: Jann_1797 Name: eno Funciton: Enolase (EC 4.2.1.11)
	Jann_1797	eno	Enolase (EC 4.2.1.11)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CceR (GapR) in Jannaschia sp. CCS1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --