Regulon of Phr in Pyrococcus abyssi GE5
| Regulator type: | Transcription factor |
| TF locus tag: | PAB0208 |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | |
| Regulog: | Phr - Thermococcales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermococcales
- By trascription factor - Phr
- By TF family - ArsR
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 5.1 Sequence: TATAGTATCATGAAGTTAGTAAA
Locus tag: PAB2180
Name: PF1931 Funciton: RecA-superfamily ATPase
Locus tag: PAB2181
Name: PF1932 Funciton: Conserved hypothetical protein |
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PF1931
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RecA-superfamily ATPase
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PF1932
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Conserved hypothetical protein
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Position: -38
Score: 6.1 Sequence: TTTAAATACTTTTAGTTAATAAA
Locus tag: PAB0736
Name: PF1042 Funciton: Conserved hypothetical protein (Have distant homology to the Chromosome partition protein Smc) |
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PF1042
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Conserved hypothetical protein (Have distant homology to the Chromosome partition protein Smc)
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Position: -55
Score: 5.6 Sequence: TTTTCTAACATTGGGTTAGAAAA
Locus tag: PAB0208
Name: phr Funciton: Heat shock response regulator Phr, ArsR family |
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phr
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Heat shock response regulator Phr, ArsR family
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Position: -38
Score: 5.7 Sequence: TTTAATAACCATTTGGAAGAAAA
Locus tag: PAB2107
Name: tip49 Funciton: TBP-interacting protein TIP49 |
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tip49
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TBP-interacting protein TIP49
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Position: -40
Score: 6.1 Sequence: TTTAGTAACCATTGGTAAAGAAA
Locus tag: PAB2086
Name: vat Funciton: ATPase, AAA+ family |
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vat
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ATPase, AAA+ family
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Position: -43
Score: 6.2 Sequence: TTTAATTACTATTGGTAACAAAA
Locus tag: PAB2072
Name: hsp20 Funciton: Small heat shock protein 20 |
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hsp20
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Small heat shock protein 20
|
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Position: -92
Score: 5.8 Sequence: TTTATTAACCTTTTCTTACTAAA
Locus tag: PAB0961
Name: impD Funciton: Inosine monophosphate dehydrogenase |
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impD
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Inosine monophosphate dehydrogenase
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Position: -24
Score: 6.3 Sequence: TTTAATAACTAAAGGTGAGTAAA
Locus tag: PAB1806
Name: PF1488 Funciton: Conserved hypothetical protein
Locus tag: PAB1807
Name: PF1489 Funciton: Conserved hypothetical protein |
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PF1488
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Conserved hypothetical protein
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PF1489
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Conserved hypothetical protein
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Position: -38
Score: 5.6 Sequence: TTTAGTTAATTTTGGTAAGAAAA
Locus tag: PAB1723
Name: PF1291 Funciton: Putative metallophosphoesterase |
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PF1291
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Putative metallophosphoesterase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |