Regulon of ScrR in Glaciecola sp. HTCC2999
| Regulator type: | Transcription factor |
| TF locus tag: | GHTCC_010100004760 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose |
| Regulog: | ScrR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By TF family - LacI
- By effector - Sucrose
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -97
Score: 6.6 Sequence: AATCTTAATCGTTTAAGTTT
Locus tag: GHTCC_010100000760
Name: null Funciton: Alpha-glucosidase
Locus tag: GHTCC_010100000755
Name: null Funciton: putative ATP synthase F0, A subunit |
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Alpha-glucosidase
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putative ATP synthase F0, A subunit
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Position: -75
Score: 5.9 Sequence: ACCCTTAATCGATTAAGTTT
Locus tag: GHTCC_010100010863
Name: GHTCC_010100010863 Funciton: putative sugar transport protein
Locus tag: GHTCC_010100010858
Name: ogl Funciton: putative oligo-1,6-glucosidase |
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GHTCC_010100010863
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putative sugar transport protein
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ogl
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putative oligo-1,6-glucosidase
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Position: -109
Score: 6 Sequence: TTACTTAATCAATTAAGAAA
Locus tag: GHTCC_010100001240
Name: omp(Scr)2 Funciton: Predicted sucrose-specific TonB-dependent receptor
Locus tag: GHTCC_010100001235
Name: trpH2 Funciton: tryptophan halogenase
Locus tag: GHTCC_010100001230
Name: trpH Funciton: tryptophan halogenase
Locus tag: GHTCC_010100001225
Name: null Funciton: metallo-beta-lactamase family protein |
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omp(Scr)2
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Predicted sucrose-specific TonB-dependent receptor
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trpH2
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tryptophan halogenase
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trpH
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tryptophan halogenase
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metallo-beta-lactamase family protein
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Position: -37
Score: 6.6 Sequence: ATACTTAATCGATTAAGATT
Locus tag: GHTCC_010100011053
Name: scrP Funciton: Sucrose phosphorylase (EC 2.4.1.7) |
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scrP
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Sucrose phosphorylase (EC 2.4.1.7)
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Position: -81
Score: 5.9 Sequence: TCGCTTAATCGATTAAGTTT
Locus tag: GHTCC_010100004760
Name: scrR Funciton: Transcriptional regulator for sucrose utilization, LacI family |
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scrR
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Transcriptional regulator for sucrose utilization, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |