Profile of regulator ScrR in Alteromonadales

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Alteromonadales bacterium TW-7
	ATW7_02142	omp(Scr)	-61	6.4	TTACTTAATCGATTAAGTAA
	ATW7_02147	scrT	-158	7	AATCTTAATCGATTAAGATA
	ATW7_02152	scrP	-38	7	TATCTTAATCGATTAAGATT
Alteromonas macleodii 'Deep ecotype'
	MADE_02629	scrR	-108	5.8	TAAGTTAAACGTTTAAGATA
	MADE_00677	scrT	-211	6.7	TATCTTAATCGTTTAAGATT
	MADE_00676	ams	-108	6.7	AATCTTAAACGATTAAGATA
	MADE_01971	scrP	-202	6.6	TATCTTAATCGATTAAGAGT
	MADE_02625	omp(Scr)	-101	6.5	ATTCTTAATCGATTAAGTAT
Glaciecola sp. HTCC2999
	GHTCC_010100001240	omp(Scr)2	-109	6	TTACTTAATCAATTAAGAAA
	GHTCC_010100000760	null	-97	6.6	AATCTTAATCGTTTAAGTTT
	GHTCC_010100010863	GHTCC_010100010863	-75	5.9	ACCCTTAATCGATTAAGTTT
	GHTCC_010100004760	scrR	-81	5.9	TCGCTTAATCGATTAAGTTT
	GHTCC_010100011053	scrP	-37	6.6	ATACTTAATCGATTAAGATT
Pseudoalteromonas atlantica T6c
	Patl_3821	scrR	-377	6.3	CATCTTAAACGTTTAAGATT
	Patl_3819	scrT	-146	6.4	TATCTTAAACGATTAAGTTG
	Patl_3820	ams	-160	6.4	CAACTTAATCGTTTAAGATA
	Patl_3820	ams	-31	5.5	TAACTTAATCGTTTTAGACA
	Patl_3822	Patl_3822	-155	6.3	AATCTTAAACGTTTAAGATG
Pseudoalteromonas tunicata D2
	PTD2_22197	omp(Scr)	-68	6.5	TAACTTAATCGATTAAGAAG
	PTD2_22192	scrT	-206	7	AATCTTAATCGATTAAGATA
	PTD2_22187	scrP	-35	7	TATCTTAATCGATTAAGATT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --