Regulon of ScrR in Alteromonas macleodii 'Deep ecotype'
| Regulator type: | Transcription factor |
| TF locus tag: | MADE_02629 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose |
| Regulog: | ScrR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 5 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By TF family - LacI
- By effector - Sucrose
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -101
Score: 6.5 Sequence: ATTCTTAATCGATTAAGTAT
Locus tag: MADE_02625
Name: omp(Scr) Funciton: Predicted sucrose-specific TonB-dependent receptor |
|||
|
omp(Scr)
|
Predicted sucrose-specific TonB-dependent receptor
|
||
|
Position: -202
Score: 6.6 Sequence: TATCTTAATCGATTAAGAGT
Locus tag: MADE_01971
Name: scrP Funciton: Sucrose phosphorylase (EC 2.4.1.7) |
|||
|
scrP
|
Sucrose phosphorylase (EC 2.4.1.7)
|
||
|
Position: -211
Score: 6.7 Sequence: TATCTTAATCGTTTAAGATT
Locus tag: MADE_00677
Name: scrT Funciton: Predicted sucrose permease, MFS family, FucP subfamily |
|||
|
scrT
|
Predicted sucrose permease, MFS family, FucP subfamily
|
||
|
Position: -108
Score: 6.7 Sequence: AATCTTAAACGATTAAGATA
Locus tag: MADE_00676
Name: ams Funciton: Amylosucrase (EC 2.4.1.4) |
|||
|
ams
|
Amylosucrase (EC 2.4.1.4)
|
||
|
Position: -108
Score: 5.8 Sequence: TAAGTTAAACGTTTAAGATA
Locus tag: MADE_02629
Name: scrR Funciton: Transcriptional regulator for sucrose utilization, LacI family |
|||
|
scrR
|
Transcriptional regulator for sucrose utilization, LacI family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |