Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RhaR in Streptomyces coelicolor A3(2)

Properties
Regulator type: Transcription factor
TF locus tag: SCO0806
Regulator family: LacI
Regulation mode: repressor
Biological process: Rhamnose utilization
Effector: Rhamnose
Regulog: RhaR - Streptomycetaceae
Statistics of regulated genes:
- Genes 20
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 14 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -228
Score: 6.1
Sequence: TGTGTGAAACGATTCAGAAC
Locus tag: SCO0811
Name: rhaG
Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: SCO0810
Name: rhaH
Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: SCO0809
Name: rhaJ
Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: SCO0808
Name: rhaF
Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: SCO0807
Name: rhaM
Funciton: L-rhamnose mutarotase
Locus tag: SCO0806
Name: rhaR
Funciton: Rhamnose utilization transcriptional regulator RhaR, LacI family
SCO0811
rhaG
L-rhamnose ABC transporter, duplicated ATP-binding component
SCO0810
rhaH
L-rhamnose ABC transporter, permease component 1
SCO0809
rhaJ
L-rhamnose ABC transporter, permease component 2
SCO0808
rhaF
L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
SCO0807
rhaM
L-rhamnose mutarotase
SCO0806
rhaR
Rhamnose utilization transcriptional regulator RhaR, LacI family
Position: -68
Score: 6.1
Sequence: GTTCTGAATCGTTTCACACA
Locus tag: SCO0812
Name: rhaI
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: SCO0813
Name: rhaEW
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: SCO0814
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: SCO0815
Name: lldE
Funciton: L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Locus tag: SCO0816
Name: lldF
Funciton: L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
Locus tag: SCO0817
Name: lldG
Funciton: L-lactate dehydrogenase, hypothetical subunit
SCO0812
rhaI
L-rhamnose isomerase (EC 5.3.1.14)
SCO0813
rhaEW
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22)
SCO0814
rhaB
Rhamnulokinase (EC 2.7.1.5)
SCO0815
lldE
L-lactate dehydrogenase, Fe-S oxidoreductase subunit
SCO0816
lldF
L-lactate dehydrogenase, iron-sulfur cluster-binding subunit
SCO0817
lldG
L-lactate dehydrogenase, hypothetical subunit
Position: -53
Score: 4.3
Sequence: GGATTGAATCGATTCAATCA
Locus tag: SCO0372
Name: rhmA2
Funciton: Predicted alpha-L-rhamnosidase
SCO0372
rhmA2
Predicted alpha-L-rhamnosidase
Position: -48
Score: 4.8
Sequence: TACTTGAAACGATTCATGAG
Locus tag: SCO1539
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: SCO1538
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: SCO1537
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
SCO1539
rhiL
Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
SCO1538
rhiF
Putatuve rhamnogalacturonides ABC transporter, permease component 1
SCO1537
rhiG
Putatuve rhamnogalacturonides ABC transporter, permease component 2
Position: -41
Score: 4
Sequence: CGAGTAAAACGATTCAATCG
Locus tag: SCO0371
Name: SCF41.30c
Funciton: COG3533 secreted protein
Locus tag: SCO0370
Name: SCF41.29c
Funciton: Predicted alpha-L-rhamnosidase
Locus tag: SCO0369
Name: SCF41.28c
Funciton: putative secreted protein
SCO0371
SCF41.30c
COG3533 secreted protein
SCO0370
SCF41.29c
Predicted alpha-L-rhamnosidase
SCO0369
SCF41.28c
putative secreted protein
Position: 22
Score: 4.9
Sequence: CGGTTGAAACGTTTCAAGCG
Locus tag: SCO0488
Name: rhmA3
Funciton: putative rhamnosidase
SCO0488
rhmA3
putative rhamnosidase
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