Regulon of GalR in Vibrio vulnificus CMCP6
| Regulator type: | Transcription factor |
| TF locus tag: | VV1_1775, VV21323 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galactose utilization |
| Effector: | Galactose |
| Regulog: | GalR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 6 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Galactose
- By pathway - Galactose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -139
Score: 5.6 Sequence: AAAAGATAACGTTTACACTA
Locus tag: VV1_1775
Name: galR Funciton: Transcriptional regulator for galactose and lactose utilization, LacI family |
|||
|
galR
|
Transcriptional regulator for galactose and lactose utilization, LacI family
|
||
|
Position: -96
Score: 5.2 Sequence: TCATGAAAACGTTTCCATAG
Locus tag: VV21329
Name: lacP Funciton: predicted lactoporin
Locus tag: VV21328
Name: VV21328 Funciton: lactose operon periplasmic protein
Locus tag: VV2_1327
Name: lacZ Funciton: Beta-galactosidase (EC 3.2.1.23) |
|||
|
lacP
|
predicted lactoporin
|
||
|
VV21328
|
lactose operon periplasmic protein
|
||
|
lacZ
|
Beta-galactosidase (EC 3.2.1.23)
|
||
|
Position: -90
Score: 5.3 Sequence: AAGGGTAAACGTTTTCACCA
Locus tag: VV21326
Name: mglB Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: VV21325
Name: mglA Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Locus tag: VV21324
Name: mglC Funciton: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) |
|||
|
mglB
|
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
|
||
|
mglA
|
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
|
||
|
mglC
|
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
|
||
|
Position: -148
Score: 5.2 Sequence: GTCTGTAAACGTTTCCATAA
Locus tag: VV21332
Name: galW Funciton: Predicted Na+/alpha-galactoside symporter |
|||
|
galW
|
Predicted Na+/alpha-galactoside symporter
|
||
|
Position: -119
Score: 4.8 Sequence: AAATGCAATCGATTACACAT
Locus tag: VV21682
Name: VV21682 Funciton: Chitinase, putative |
|||
|
VV21682
|
Chitinase, putative
|
||
|
Position: -125
Score: 6.4 Sequence: TAGTGAAAACGTTTACACTT
Locus tag: VV1_1770
Name: galE Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
Locus tag: VV1_1771
Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) |
|||
|
galE
|
UDP-glucose 4-epimerase (EC 5.1.3.2)
|
||
|
galT
|
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |