Regulon of GalR in Vibrio shilonii AK1
| Regulator type: | Transcription factor |
| TF locus tag: | VSAK1_10693, VSAK1_00922 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galactose utilization |
| Effector: | Galactose |
| Regulog: | GalR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Galactose
- By pathway - Galactose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -245
Score: 5.6 Sequence: TCATGGAAACGTTTACAATT
Position: -115
Score: 5.2 Sequence: TTTTGGAAACGATTACTCTA
Locus tag: VSAK1_00922
Name: galR Funciton: Transcriptional regulator for galactose and lactose utilization, LacI family |
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galR
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Transcriptional regulator for galactose and lactose utilization, LacI family
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Position: -223
Score: 4.7 Sequence: AATTGTTAACGTATCCAAAT
Position: -58
Score: 5.6 Sequence: CTGTGTAAACGTTTCCAAAT
Locus tag: VSAK1_10773
Name: lacE Funciton: Probable lactose uptake ABC transporter, periplasmic solute-binding protein
Locus tag: VSAK1_10768
Name: lacF Funciton: Probable lactose uptake ABC transporter, permease protein 1
Locus tag: VSAK1_10763
Name: lacG Funciton: Probable lactose uptake ABC transporter, permease protein 2
Locus tag: VSAK1_10758
Name: lacZ Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: VSAK1_10753
Name: lacK Funciton: Probable lactose uptake ABC transporter, ATP-binding protein |
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lacE
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Probable lactose uptake ABC transporter, periplasmic solute-binding protein
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lacF
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Probable lactose uptake ABC transporter, permease protein 1
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lacG
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Probable lactose uptake ABC transporter, permease protein 2
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lacZ
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Beta-galactosidase (EC 3.2.1.23)
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lacK
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Probable lactose uptake ABC transporter, ATP-binding protein
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Position: -327
Score: 5.5 Sequence: TATTGTAAACGTTCTCATAA
Position: -97
Score: 4.7 Sequence: TGGGTTAAACGTTTTCACTT
Locus tag: VSAK1_10743
Name: mglB Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: VSAK1_10738
Name: mglA Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Locus tag: VSAK1_10733
Name: mglC Funciton: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) |
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mglB
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Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
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mglA
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Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
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mglC
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Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
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Position: -238
Score: 4.7 Sequence: TTGTGTAATCGTTTAACTTT
Position: -140
Score: 6.6 Sequence: TAGTGTAAACGTTTACACTT
Locus tag: VSAK1_10728
Name: galE Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
Locus tag: VSAK1_10723
Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)
Locus tag: VSAK1_10718
Name: galK Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: VSAK1_10713
Name: galM Funciton: Aldose 1-epimerase (EC 5.1.3.3) |
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galE
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UDP-glucose 4-epimerase (EC 5.1.3.2)
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galT
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Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)
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galK
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Galactokinase (EC 2.7.1.6)
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galM
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Aldose 1-epimerase (EC 5.1.3.3)
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Position: -103
Score: 5.6 Sequence: CAGTGTAAACGTTTCCAGTT
Locus tag: VSAK1_00937
Name: galW Funciton: Predicted Na+/alpha-galactoside symporter |
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galW
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Predicted Na+/alpha-galactoside symporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |