Regulon of PsiR in Rhizobium sp. NGR234
| Regulator type: | Transcription factor |
| TF locus tag: | NGR_b11520 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Psicose utilization |
| Effector: | Psicose |
| Regulog: | PsiR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By effector - Psicose
- By pathway - Psicose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -173
Score: 6.6 Sequence: TTGCACCATCGATTGTGCAA
Position: -151
Score: 5.2 Sequence: AAGAAATATCGATTGTGCAG
Locus tag: NGR_b11530
Name: psiA Funciton: Predicted psicose ABC transporter, substrate-binding protein
Locus tag: NGR_b11540
Name: psiB Funciton: Predicted psicose ABC transporter, ATP-binding protein
Locus tag: NGR_b11550
Name: psiC Funciton: Predicted psicose ABC transporter, inner membrane protein
Locus tag: NGR_b11560
Name: psiD Funciton: Predicted psicose ABC transporter, inner membrane protein
Locus tag: NGR_b11570
Name: psiE Funciton: Fructose:psicose-3-epimerase (EC 5.3.1.-)
Locus tag: NGR_b11580
Name: psiK Funciton: Predicted fructokinase, FGGY family
Locus tag: NGR_b11590
Name: fucA Funciton: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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psiA
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Predicted psicose ABC transporter, substrate-binding protein
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psiB
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Predicted psicose ABC transporter, ATP-binding protein
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psiC
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Predicted psicose ABC transporter, inner membrane protein
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psiD
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Predicted psicose ABC transporter, inner membrane protein
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psiE
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Fructose:psicose-3-epimerase (EC 5.3.1.-)
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psiK
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Predicted fructokinase, FGGY family
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fucA
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Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
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Position: -109
Score: 5.2 Sequence: CTGCACAATCGATATTTCTT
Position: -87
Score: 6.6 Sequence: TTGCACAATCGATGGTGCAA
Locus tag: NGR_b11520
Name: psiR Funciton: Predicted transcriptional regulator for psicose utilization, LacI family |
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psiR
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Predicted transcriptional regulator for psicose utilization, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |