Profile of regulator PsiR in Rhizobiales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
|
| Biological process: |
Psicose utilization |
| Effector: |
Psicose |
| Regulog: |
PsiR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu4744 |
psiA |
-288 |
6.4 |
TTGCACCATCGATTGTGCAG |
|
Atu4743 |
psiR |
-116 |
5.8 |
ATGCACAATCGATATTGCCA |
|
Atu4743 |
psiR |
-94 |
6.4 |
CTGCACAATCGATGGTGCAA |
|
Atu4744 |
psiA |
-266 |
5.8 |
TGGCAATATCGATTGTGCAT |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
pRL120191 |
psiA |
-149 |
5.3 |
AAGAAAGATCGATTGTGCAA |
|
pRL120191 |
psiA |
-171 |
6.6 |
TTGCACCATCGATTGTGCAA |
|
pRL120189 |
psiR |
-116 |
5.3 |
TTGCACAATCGATCTTTCTT |
|
pRL120189 |
psiR |
-94 |
6.6 |
TTGCACAATCGATGGTGCAA |
|
Rhizobium sp. NGR234
|
|
NGR_b11530 |
psiA |
-173 |
6.6 |
TTGCACCATCGATTGTGCAA |
|
NGR_b11530 |
psiA |
-151 |
5.2 |
AAGAAATATCGATTGTGCAG |
|
NGR_b11520 |
psiR |
-109 |
5.2 |
CTGCACAATCGATATTTCTT |
|
NGR_b11520 |
psiR |
-87 |
6.6 |
TTGCACAATCGATGGTGCAA |
|
Sinorhizobium meliloti 1021
|
|
SMb20484 |
psiA |
-151 |
5.4 |
AAGAAATATCGATTGTGCAA |
|
SMb20484 |
psiA |
-173 |
6.6 |
TTGCACCATCGATTGTGCAA |
|
SMb20483 |
psiR |
-142 |
5.4 |
TTGCACAATCGATATTTCTT |
|
SMb20483 |
psiR |
-120 |
6.6 |
TTGCACAATCGATGGTGCAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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