Regulon of RhiR in Rhizobium sp. NGR234

Properties
Regulator type:	Transcription factor
TF locus tag:	NGR_b17740
Regulator family:	LacI
Regulation mode:
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides
Regulog:	RhiR - Rhizobiales
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By effector - Rhamogalacturonate oligosaccharides
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -175 Score: 6 Sequence: GTATGAAAATGTTTTCATCA Position: -32 Score: 5.9 Sequence: TTATGAAAAAGTTTTCATGA Locus tag: NGR_b17670 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
	NGR_b17670	rhiL	Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Position: -182 Score: 5.9 Sequence: TCATGAAAACTTTTTCATAA Position: -39 Score: 6 Sequence: TGATGAAAACATTTTCATAC Locus tag: NGR_b17680 Name: rhiX Funciton: hypothetical protein Locus tag: NGR_b17690 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: NGR_b17700 Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: NGR_b17710 Name: rhiK Funciton: Putatuve rhamnogalacturonides ABC transporter, ATP-binding protein Locus tag: NGR_b17720 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: NGR_b17730 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
	NGR_b17680	rhiX	hypothetical protein
	NGR_b17690	rhiN	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	NGR_b17700	pgl	Polygalacturonase (EC 3.2.1.15)
	NGR_b17710	rhiK	Putatuve rhamnogalacturonides ABC transporter, ATP-binding protein
	NGR_b17720	rhiG	Putatuve rhamnogalacturonides ABC transporter, permease component 2
	NGR_b17730	rhiF	Putatuve rhamnogalacturonides ABC transporter, permease component 1

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD