Profile of regulator RhiR in Rhizobiales

Properties
Regulator family:	LacI
Regulation mode:
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides
Regulog:	RhiR - Rhizobiales

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Agrobacterium tumefaciens str. C58 (Cereon)
	Atu4564	rhiL	-171	6.2	TAATGAAATTATTTTCACGA
	Atu4564	rhiL	-31	6.2	TTGTGAAAATGTTTTCATTG
	Atu4562	rhiX	-183	6.2	CAATGAAAACATTTTCACAA
	Atu4562	rhiX	-43	6.2	TCGTGAAAATAATTTCATTA
Rhizobium etli CFN 42
	RHE_PF00297	rhiL	-171	5.9	GCATGAAAATCTTTTCATTC
	RHE_PF00297	rhiL	-30	6.2	TGATGAAAATGTTTTCATGG
	RHE_PF00296	rhiX	-214	6.2	CCATGAAAACATTTTCATCA
	RHE_PF00296	rhiX	-73	5.9	GAATGAAAAGATTTTCATGC
Rhizobium leguminosarum bv. viciae 3841
	pRL120685	rhiL	-164	6.5	CTATGAAAATATTTTCATTA
	pRL120685	rhiL	-24	6.5	TAATGAAAATGTTTTCATGG
	pRL120686	rhiX	-180	6.5	CCATGAAAACATTTTCATTA
	pRL120686	rhiX	-40	6.5	TAATGAAAATATTTTCATAG
Rhizobium sp. NGR234
	NGR_b17670	rhiL	-175	6	GTATGAAAATGTTTTCATCA
	NGR_b17670	rhiL	-32	5.9	TTATGAAAAAGTTTTCATGA
	NGR_b17680	rhiX	-182	5.9	TCATGAAAACTTTTTCATAA
	NGR_b17680	rhiX	-39	6	TGATGAAAACATTTTCATAC

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --