Regulon of RhiR in Rhizobium leguminosarum bv. viciae 3841

Properties
Regulator type:	Transcription factor
TF locus tag:	pRL120694
Regulator family:	LacI
Regulation mode:
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides
Regulog:	RhiR - Rhizobiales
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By effector - Rhamogalacturonate oligosaccharides
By pathway - Rhamnogalacturonides utilization

Regulated operons
	Locus Tag	Name	Function
Position: -164 Score: 6.5 Sequence: CTATGAAAATATTTTCATTA Position: -24 Score: 6.5 Sequence: TAATGAAAATGTTTTCATGG Locus tag: pRL120685 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
	pRL120685	rhiL	Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Position: -180 Score: 6.5 Sequence: CCATGAAAACATTTTCATTA Position: -40 Score: 6.5 Sequence: TAATGAAAATATTTTCATAG Locus tag: pRL120686 Name: rhiX Funciton: hypothetical protein Locus tag: pRL120687 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: pRL120688 Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15) Locus tag: pRL120689 Name: rhiK Funciton: Putatuve rhamnogalacturonides ABC transporter, ATP-binding protein Locus tag: pRL120690 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: pRL120691 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
	pRL120686	rhiX	hypothetical protein
	pRL120687	rhiN	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
	pRL120688	pgl	Polygalacturonase (EC 3.2.1.15)
	pRL120689	rhiK	Putatuve rhamnogalacturonides ABC transporter, ATP-binding protein
	pRL120690	rhiG	Putatuve rhamnogalacturonides ABC transporter, permease component 2
	pRL120691	rhiF	Putatuve rhamnogalacturonides ABC transporter, permease component 1

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD