Regulon of SocR in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu5007
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Santhopine utilization
Effector:	Mannopine; Deoxyfructosyl glutamine
Regulog:	SocR - Rhizobiales
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By effector - Mannopine
By effector - Deoxyfructosyl glutamine
By pathway - Santhopine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -104 Score: 6 Sequence: TACTGAGACCGGTCTCAATG Position: -83 Score: 6.3 Sequence: GAATGAGACCGGTCTCTTTG Locus tag: Atu5007 Name: socR Funciton: Santhopine catabolism transcriptional regulator, LacI family
	Atu5007	socR	Santhopine catabolism transcriptional regulator, LacI family
Position: -162 Score: 6.3 Sequence: CAAAGAGACCGGTCTCATTC Position: -141 Score: 6 Sequence: CATTGAGACCGGTCTCAGTA Locus tag: Atu5006 Name: socA Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, periplasmic amino acid-binding protein Locus tag: Atu5005 Name: socB Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, ATP-binding protein fused to permease component Locus tag: Atu5004 Name: socC Funciton: NAD-depending oxidoreductase involved in deoxyfructosyl glutamine utilization Locus tag: Atu5003 Name: socD Funciton: Fructosyl-amino acid oxidase (EC 1.5.3.-)
	Atu5006	socA	Deoxyfructosyl glutamine and mannopine ABC transporter, periplasmic amino acid-binding protein
	Atu5005	socB	Deoxyfructosyl glutamine and mannopine ABC transporter, ATP-binding protein fused to permease component
	Atu5004	socC	NAD-depending oxidoreductase involved in deoxyfructosyl glutamine utilization
	Atu5003	socD	Fructosyl-amino acid oxidase (EC 1.5.3.-)

Export
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