Profile of regulator SocR in Rhizobiales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
Santhopine utilization |
| Effector: |
Mannopine; Deoxyfructosyl glutamine |
| Regulog: |
SocR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu5007 |
socR |
-104 |
6 |
TACTGAGACCGGTCTCAATG |
|
Atu5006 |
socA |
-141 |
6 |
CATTGAGACCGGTCTCAGTA |
|
Atu5007 |
socR |
-83 |
6.3 |
GAATGAGACCGGTCTCTTTG |
|
Atu5006 |
socA |
-162 |
6.3 |
CAAAGAGACCGGTCTCATTC |
|
Rhizobium etli CFN 42
|
|
RHE_PF00256 |
socR |
-96 |
5.4 |
CAATGATACCGGTCTCCAAT |
|
RHE_PF00256 |
socR |
-75 |
6 |
AAAAGAGACCGGTCTCACGA |
|
RHE_PF00255 |
socA |
-105 |
5.4 |
ATTGGAGACCGGTATCATTG |
|
RHE_PF00255 |
socA |
-126 |
6 |
TCGTGAGACCGGTCTCTTTT |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
pRL120732 |
socR |
-76 |
6.1 |
TAAAGAGACCGGTCTCACAA |
|
pRL120732 |
socR |
-97 |
5.4 |
ACAAGATACCGGTCTCTGAT |
|
pRL120733 |
socA |
-104 |
5.4 |
ATCAGAGACCGGTATCTTGT |
|
pRL120733 |
socA |
-125 |
6.1 |
TTGTGAGACCGGTCTCTTTA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
