Profile of regulator SocR in Rhizobiales

Properties
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Santhopine utilization
Effector:	Mannopine; Deoxyfructosyl glutamine
Regulog:	SocR - Rhizobiales

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By effector - Mannopine
By effector - Deoxyfructosyl glutamine
By pathway - Santhopine utilization

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Agrobacterium tumefaciens str. C58 (Cereon)
	Atu5007	socR	-104	6	TACTGAGACCGGTCTCAATG
	Atu5006	socA	-141	6	CATTGAGACCGGTCTCAGTA
	Atu5007	socR	-83	6.3	GAATGAGACCGGTCTCTTTG
	Atu5006	socA	-162	6.3	CAAAGAGACCGGTCTCATTC
Rhizobium etli CFN 42
	RHE_PF00256	socR	-96	5.4	CAATGATACCGGTCTCCAAT
	RHE_PF00256	socR	-75	6	AAAAGAGACCGGTCTCACGA
	RHE_PF00255	socA	-105	5.4	ATTGGAGACCGGTATCATTG
	RHE_PF00255	socA	-126	6	TCGTGAGACCGGTCTCTTTT
Rhizobium leguminosarum bv. viciae 3841
	pRL120732	socR	-76	6.1	TAAAGAGACCGGTCTCACAA
	pRL120732	socR	-97	5.4	ACAAGATACCGGTCTCTGAT
	pRL120733	socA	-104	5.4	ATCAGAGACCGGTATCTTGT
	pRL120733	socA	-125	6.1	TTGTGAGACCGGTCTCTTTA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD