Regulon of HrcA in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_4335
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Comamonadaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 22 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -55 Score: 6.9 Sequence: TTAGCACTCCCTCCAATCGAGTGCTAA Locus tag: Vapar_4379 Name: rpoH Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
	Vapar_4379	rpoH	Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
Position: -110 Score: 7 Sequence: TTAGCACTCGCTGCTGACGAGTGCTAA Locus tag: Vapar_1119 Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES Locus tag: Vapar_1118 Name: groL Funciton: Heat shock protein 60 family chaperone GroEL
	Vapar_1119	groS	Heat shock protein 60 family co-chaperone GroES
	Vapar_1118	groL	Heat shock protein 60 family chaperone GroEL

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD