Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Clostridium difficile 630

Properties
Regulator type: Transcription factor
TF locus tag: CD0171
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Clostridia-2
Statistics of regulated genes:
- Genes 23
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 34 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -264
Score: 5.5
Sequence: TTGATAAATTATTAACAT
Position: -187
Score: 4.5
Sequence: TTGTTAAAAAAATAATTT
Locus tag: CD2354
Name: grdE
Funciton: Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2)
CD2354
grdE
Glycine reductase component B beta subunit (EC 1.21.4.2) / Glycine reductase component B alpha subunit (EC 1.21.4.2)
Position: -190
Score: 4.6
Sequence: TTGTTAATTAAATCATAA
Position: -129
Score: 5.4
Sequence: ATGTTAATTTAATAACAA
Position: -66
Score: 5.2
Sequence: TTGTTAATTTAATAACGA
Locus tag: CD2344
Name: CD2344
Funciton: putative transport protein
Locus tag: CD2343
Name: cat1
Funciton: Succinyl-CoA:coenzyme A transferase (EC 2.8.3.-)
Locus tag: CD2342
Name: sucD
Funciton: Succinate-semialdehyde dehydrogenase, CoA-dependent
Locus tag: CD2341
Name: abfD
Funciton: 4-hydroxybutanoyl-CoA dehydratase (EC 4.2.1.-)
Locus tag: CD2340
Name: CD2340
Funciton: hypothetical protein
Locus tag: CD2339
Name: abfT
Funciton: 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
Locus tag: CD2338
Name: 4hbd
Funciton: NAD-dependent 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61)
CD2344
CD2344
putative transport protein
CD2343
cat1
Succinyl-CoA:coenzyme A transferase (EC 2.8.3.-)
CD2342
sucD
Succinate-semialdehyde dehydrogenase, CoA-dependent
CD2341
abfD
4-hydroxybutanoyl-CoA dehydratase (EC 4.2.1.-)
CD2340
CD2340
hypothetical protein
CD2339
abfT
4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
CD2338
4hbd
NAD-dependent 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61)
Position: -96
Score: 4.6
Sequence: TTGATATAATATAATCAA
Locus tag: CD0171
Name: rex
Funciton: Redox-sensitive transcriptional regulator Rex
CD0171
rex
Redox-sensitive transcriptional regulator Rex
Position: -146
Score: 5.1
Sequence: ATGTTAAAAAAATAACTT
Position: -103
Score: 5.6
Sequence: ATGTTAATAAATTAACAT
Locus tag: CD2966
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
CD2966
adhE
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -193
Score: 5
Sequence: TTGATTTTAAATTAACAA
Locus tag: CD1054
Name: bcd2
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CD1055
Name: etfB2
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CD1056
Name: etfA2
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: CD1057
Name: crt2
Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: CD1058
Name: hbd
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: CD1059
Name: thlA1
Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
CD1054
bcd2
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
CD1055
etfB2
Electron transfer flavoprotein, beta subunit
CD1056
etfA2
Electron transfer flavoprotein, alpha subunit
CD1057
crt2
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
CD1058
hbd
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
CD1059
thlA1
Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -63
Score: 5.4
Sequence: TTGTTTAAAATATAACAA
Locus tag: CD1623
Name: fprA
Funciton: H(2)O-forming NADH oxidase (EC 1.6.3.-)
CD1623
fprA
H(2)O-forming NADH oxidase (EC 1.6.3.-)
Position: -113
Score: 4
Sequence: TTGTTATAAAATAAATTA
Locus tag: CD1170
Name: PF09861
Funciton: Protein of unknown function DUF2088
Locus tag: CD1171
Name: etfB
Funciton: Electron transfer flavoprotein beta-subunit
Locus tag: CD1172
Name: etfA
Funciton: Electron transfer flavoprotein alpha-subunit
Locus tag: CD1173
Name: glcD
Funciton: Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
CD1170
PF09861
Protein of unknown function DUF2088
CD1171
etfB
Electron transfer flavoprotein beta-subunit
CD1172
etfA
Electron transfer flavoprotein alpha-subunit
CD1173
glcD
Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
Position: -34
Score: 5.7
Sequence: ATGTTAATAAATTAACAA
Locus tag: CD2707
Name: CD2707
Funciton: Transport protein, MFS family
CD2707
CD2707
Transport protein, MFS family
Position: -112
Score: 5.2
Sequence: ATGTTAAATAAATAACTA
Locus tag: CD2540
Name: noxE
Funciton: NADH oxidase (EC 1.6.99.3)
CD2540
noxE
NADH oxidase (EC 1.6.99.3)
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