Regulon of Rex in Eubacterium rectale ATCC 33656
| Regulator type: | Transcription factor |
| TF locus tag: | EUBREC_1967 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 10 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -91
Score: 4.8 Sequence: TTGACAAAAATTTGTCAA
Locus tag: EUBREC_1017
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
|||
|
crt
|
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
|
||
|
Position: -60
Score: 5.2 Sequence: TTGTTATTTTTTTAACGT
Locus tag: EUBREC_3075
Name: cat2 Funciton: 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) |
|||
|
cat2
|
4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-)
|
||
|
Position: -18
Score: 5.3 Sequence: ATGATAATTTTTTAACAT
Locus tag: EUBREC_1058
Name: pfkA Funciton: 6-phosphofructokinase (EC 2.7.1.11) |
|||
|
pfkA
|
6-phosphofructokinase (EC 2.7.1.11)
|
||
|
Position: -111
Score: 5.3 Sequence: TTGACAAATTATTAACAA
Position: -54
Score: 5.4 Sequence: TTGTTAAAAAATTAACAG
Locus tag: EUBREC_0733
Name: null Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) |
|||
|
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
|
|||
|
Position: -98
Score: 5 Sequence: TTGTTAAGTTTTTAACGA
Locus tag: EUBREC_2843
Name: aroE Funciton: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
Locus tag: EUBREC_2842
Name: kefA Funciton: potassium efflux system KefA
Locus tag: EUBREC_2841
Name: aroD Funciton: 3-dehydroquinate dehydratase I (EC 4.2.1.10) |
|||
|
aroE
|
Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
|
||
|
kefA
|
potassium efflux system KefA
|
||
|
aroD
|
3-dehydroquinate dehydratase I (EC 4.2.1.10)
|
||
|
Position: -219
Score: 5.3 Sequence: TTGTGAAAAAAATAACAA
Locus tag: EUBREC_2390
Name: phf1 Funciton: [Fe] hydrogenase (EC 1.12.7.2) |
|||
|
phf1
|
[Fe] hydrogenase (EC 1.12.7.2)
|
||
|
Position: -225
Score: 4.8 Sequence: ATGTTAAATTCTTAACAC
Locus tag: EUBREC_1967
Name: rex Funciton: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) |
|||
|
rex
|
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
|
||
|
Position: -78
Score: 5 Sequence: GTGTTAAAAATTTAACTT
Locus tag: EUBREC_0700
Name: fba Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
|||
|
fba
|
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
|
||
|
Position: -82
Score: 5.1 Sequence: TTGATTTTTTTTTAACAA
Locus tag: EUBREC_2002
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
|||
|
pckA
|
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
|
||
|
Position: -78
Score: 5.2 Sequence: TAGTGAAAATTTTAACAA
Locus tag: EUBREC_1522
Name: gap Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
|||
|
gap
|
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |