Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Clostridium bolteae ATCC BAA-613

Properties
Regulator type: Transcription factor
TF locus tag: CLOBOL_04148
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Clostridia-3
Statistics of regulated genes:
- Genes 17
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 121 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -79
Score: 4.3
Sequence: TTGACATTTTTTTGACGT
Locus tag: CLOBOL_04148
Name: rex
Funciton: Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
CLOBOL_04148
rex
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
Position: -133
Score: 4.6
Sequence: ATGATAAAAATTTATTAT
Position: -75
Score: 5.4
Sequence: TTGTTATAATAATAACAT
Locus tag: CLOBOL_00463
Name: asrA
Funciton: anaerobic sulfite reductase, A subunit
Locus tag: CLOBOL_00462
Name: asrB
Funciton: anaerobic sulfite reductase subunit B
Locus tag: CLOBOL_00461
Name: asrC
Funciton: anaerobic sulfite reductase subunit C
CLOBOL_00463
asrA
anaerobic sulfite reductase, A subunit
CLOBOL_00462
asrB
anaerobic sulfite reductase subunit B
CLOBOL_00461
asrC
anaerobic sulfite reductase subunit C
Position: -33
Score: 5.4
Sequence: TTGTTACAATTTTAACAA
Locus tag: CLOBOL_02457
Name: COG1959
Funciton: Predicted transcriptional regulator, Rrf2 family
CLOBOL_02457
COG1959
Predicted transcriptional regulator, Rrf2 family
Position: -81
Score: 5.4
Sequence: TTGTTAAAATATTAACAG
Locus tag: CLOBOL_05166
Name: pgpB
Funciton: putative phosphatidylglycerophosphatase B
Locus tag: CLOBOL_05167
Name: COG491
Funciton: Zn-dependent hydrolase
CLOBOL_05166
pgpB
putative phosphatidylglycerophosphatase B
CLOBOL_05167
COG491
Zn-dependent hydrolase
Position: -141
Score: 5.5
Sequence: TTGTTAAATTTTTATCAT
Locus tag: CLOBOL_06020
Name: pncB
Funciton: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
CLOBOL_06020
pncB
Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Position: -61
Score: 5.6
Sequence: TTGATATAATTTTAACAA
Locus tag: CLOBOL_05631
Name: phf1
Funciton: [Fe] hydrogenase (EC 1.12.7.2)
CLOBOL_05631
phf1
[Fe] hydrogenase (EC 1.12.7.2)
Position: -37
Score: 5.2
Sequence: TAGTTAATAAAATAACAA
Locus tag: CLOBOL_02749
Name: fba
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
CLOBOL_02749
fba
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -92
Score: 5.7
Sequence: TTGTTATAATATTAACAA
Locus tag: CLOBOL_03318
Name: ladH
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
CLOBOL_03318
ladH
Lactaldehyde reductase (EC 1.1.1.77)
Position: -54
Score: 5.3
Sequence: TTGATTAATATTTAACAA
Locus tag: CLOBOL_05214
Name: gap
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: CLOBOL_05215
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: CLOBOL_05216
Name: tpi
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
Locus tag: CLOBOL_05217
Name: pgm
Funciton: Phosphoglycerate mutase (EC 5.4.2.1)
CLOBOL_05214
gap
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
CLOBOL_05215
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
CLOBOL_05216
tpi
Triosephosphate isomerase (EC 5.3.1.1)
CLOBOL_05217
pgm
Phosphoglycerate mutase (EC 5.4.2.1)
Position: -119
Score: 5.2
Sequence: ACGTTAAAAATTTATCAA
Locus tag: CLOBOL_00811
Name: stpK
Funciton: Mn2+-dependent serine/threonine protein kinase
CLOBOL_00811
stpK
Mn2+-dependent serine/threonine protein kinase
Position: -135
Score: 4.8
Sequence: TTGACATTTTTTTAACGA
Position: -93
Score: 5.6
Sequence: TTGTTAATTAATTATCAA
Locus tag: CLOBOL_06541
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
CLOBOL_06541
adhE
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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