Regulon of DVUA0100 in Desulfovibrio vulgaris Hildenborough
| Regulator type: | Transcription factor |
| TF locus tag: | DVUA0100 |
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | |
| Effector: | |
| Regulog: | DVUA0100 - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 34 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -300
Score: 4.5 Sequence: GCCAACAGCATGGGC
Position: -277
Score: 5.2 Sequence: GCCAACGCTATTGGC
Locus tag: null
Name: null Funciton: null |
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null
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Position: -549
Score: 5.4 Sequence: GCCAACATCGTTGCC
Position: -517
Score: 4.5 Sequence: GGCAGTGTTGTTGGC
Position: -227
Score: 4.3 Sequence: TGCAACGTTGTTGCT
Locus tag: DVUA0106
Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Locus tag: DVUA0105
Name: null Funciton: Type III secretion chaperone SycN
Locus tag: null
Name: null Funciton: hypothetical protein
Locus tag: null
Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y)
Locus tag: DVUA0104
Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
Locus tag: DVUA0103
Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
Locus tag: DVUA0102
Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
Locus tag: DVUA0101
Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
Locus tag: DVUA0100
Name: flrC Funciton: transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
Locus tag: null
Name: null Funciton: hypothetical protein
Locus tag: DVUA0099
Name: null Funciton: protein serine/threonine phosphatase |
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Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
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Type III secretion chaperone SycN
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hypothetical protein
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Chaperone protein YscY (Yop proteins translocation protein Y)
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sctV
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Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
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invX
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Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
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escT
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Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
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flhB
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Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
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flrC
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transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
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hypothetical protein
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protein serine/threonine phosphatase
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Position: -204
Score: 4.5 Sequence: GCCAACAACACTGCC
Position: -172
Score: 5.4 Sequence: GGCAACGATGTTGGC
Locus tag: null
Name: null Funciton: hypothetical protein
Locus tag: DVUA0109
Name: null Funciton: Type III secretion chaperone protein for YopD (SycD)
Locus tag: DVUA0110
Name: DVUA0110 Funciton: Type III secretion host injection protein (YopB)
Locus tag: DVUA0111
Name: null Funciton: Type III secretion host injection and negative regulator protein (YopD)
Locus tag: null
Name: null Funciton: Tir chaperone family protein
Locus tag: DVUA0112
Name: yscC Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
Locus tag: DVUA0113
Name: null Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
Locus tag: DVUA0114
Name: null Funciton: hypothetical protein
Locus tag: DVUA0115
Name: null Funciton: Type III secretion system protein, YscF family
Locus tag: DVUA0116
Name: null Funciton: hypothetical protein
Locus tag: null
Name: null Funciton: hypothetical protein
Locus tag: DVUA0117
Name: escJ Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
Locus tag: null
Name: null Funciton: hypothetical protein
Locus tag: DVUA0118
Name: sctL Funciton: Type III secretion cytoplasmic protein (YscL)
Locus tag: DVUA0119
Name: sctN Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
Locus tag: null
Name: null Funciton: Type III secretion spans bacterial envelope protein (YscO)
Locus tag: DVUA0120
Name: null Funciton: HpaP protein; Type III secretion protein (YscP)
Locus tag: DVUA0121
Name: null Funciton: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
Locus tag: DVUA0122
Name: yscR Funciton: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
Locus tag: DVUA0123
Name: null Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
Locus tag: DVUA0124
Name: rsbW Funciton: putative anti-sigma regulatory factor, serine/threonine protein kinase
Locus tag: DVUA0125
Name: slt Funciton: transglycosylase, SLT family |
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hypothetical protein
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Type III secretion chaperone protein for YopD (SycD)
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DVUA0110
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Type III secretion host injection protein (YopB)
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Type III secretion host injection and negative regulator protein (YopD)
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Tir chaperone family protein
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yscC
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Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
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Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
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hypothetical protein
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Type III secretion system protein, YscF family
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hypothetical protein
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hypothetical protein
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escJ
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Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
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hypothetical protein
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sctL
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Type III secretion cytoplasmic protein (YscL)
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sctN
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Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
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Type III secretion spans bacterial envelope protein (YscO)
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HpaP protein; Type III secretion protein (YscP)
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Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
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yscR
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Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
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anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
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rsbW
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putative anti-sigma regulatory factor, serine/threonine protein kinase
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slt
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transglycosylase, SLT family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |