Regulon of DVUA0100 in Desulfovibrio vulgaris Hildenborough

Properties
Regulator type:	Transcription factor
TF locus tag:	DVUA0100
Regulator family:	Fis
Regulation mode:	activator
Biological process:
Effector:
Regulog:	DVUA0100 - Desulfovibrionales
Statistics of regulated genes:
- Genes	34
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis

Regulated operons
	Locus Tag	Name	Function
Position: -300 Score: 4.5 Sequence: GCCAACAGCATGGGC Position: -277 Score: 5.2 Sequence: GCCAACGCTATTGGC Locus tag: null Name: null Funciton: null
	null		null
Position: -549 Score: 5.4 Sequence: GCCAACATCGTTGCC Position: -517 Score: 4.5 Sequence: GGCAGTGTTGTTGGC Position: -227 Score: 4.3 Sequence: TGCAACGTTGTTGCT Locus tag: DVUA0106 Name: null Funciton: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA) Locus tag: DVUA0105 Name: null Funciton: Type III secretion chaperone SycN Locus tag: null Name: null Funciton: hypothetical protein Locus tag: null Name: null Funciton: Chaperone protein YscY (Yop proteins translocation protein Y) Locus tag: DVUA0104 Name: sctV Funciton: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) Locus tag: DVUA0103 Name: invX Funciton: Type III secretion inner membrane protein (YscS,homologous to flagellar export components) Locus tag: DVUA0102 Name: escT Funciton: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) Locus tag: DVUA0101 Name: flhB Funciton: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) Locus tag: DVUA0100 Name: flrC Funciton: transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Locus tag: null Name: null Funciton: hypothetical protein Locus tag: DVUA0099 Name: null Funciton: protein serine/threonine phosphatase
	DVUA0106		Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
	DVUA0105		Type III secretion chaperone SycN
	null		hypothetical protein
	null		Chaperone protein YscY (Yop proteins translocation protein Y)
	DVUA0104	sctV	Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
	DVUA0103	invX	Type III secretion inner membrane protein (YscS,homologous to flagellar export components)
	DVUA0102	escT	Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
	DVUA0101	flhB	Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
	DVUA0100	flrC	transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
	null		hypothetical protein
	DVUA0099		protein serine/threonine phosphatase
Position: -204 Score: 4.5 Sequence: GCCAACAACACTGCC Position: -172 Score: 5.4 Sequence: GGCAACGATGTTGGC Locus tag: null Name: null Funciton: hypothetical protein Locus tag: DVUA0109 Name: null Funciton: Type III secretion chaperone protein for YopD (SycD) Locus tag: DVUA0110 Name: DVUA0110 Funciton: Type III secretion host injection protein (YopB) Locus tag: DVUA0111 Name: null Funciton: Type III secretion host injection and negative regulator protein (YopD) Locus tag: null Name: null Funciton: Tir chaperone family protein Locus tag: DVUA0112 Name: yscC Funciton: Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) Locus tag: DVUA0113 Name: null Funciton: Type III secretion inner membrane protein (YscD,homologous to flagellar export components) Locus tag: DVUA0114 Name: null Funciton: hypothetical protein Locus tag: DVUA0115 Name: null Funciton: Type III secretion system protein, YscF family Locus tag: DVUA0116 Name: null Funciton: hypothetical protein Locus tag: null Name: null Funciton: hypothetical protein Locus tag: DVUA0117 Name: escJ Funciton: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Locus tag: null Name: null Funciton: hypothetical protein Locus tag: DVUA0118 Name: sctL Funciton: Type III secretion cytoplasmic protein (YscL) Locus tag: DVUA0119 Name: sctN Funciton: Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) Locus tag: null Name: null Funciton: Type III secretion spans bacterial envelope protein (YscO) Locus tag: DVUA0120 Name: null Funciton: HpaP protein; Type III secretion protein (YscP) Locus tag: DVUA0121 Name: null Funciton: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) Locus tag: DVUA0122 Name: yscR Funciton: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) Locus tag: DVUA0123 Name: null Funciton: anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV Locus tag: DVUA0124 Name: rsbW Funciton: putative anti-sigma regulatory factor, serine/threonine protein kinase Locus tag: DVUA0125 Name: slt Funciton: transglycosylase, SLT family
	null		hypothetical protein
	DVUA0109		Type III secretion chaperone protein for YopD (SycD)
	DVUA0110	DVUA0110	Type III secretion host injection protein (YopB)
	DVUA0111		Type III secretion host injection and negative regulator protein (YopD)
	null		Tir chaperone family protein
	DVUA0112	yscC	Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
	DVUA0113		Type III secretion inner membrane protein (YscD,homologous to flagellar export components)
	DVUA0114		hypothetical protein
	DVUA0115		Type III secretion system protein, YscF family
	DVUA0116		hypothetical protein
	null		hypothetical protein
	DVUA0117	escJ	Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
	null		hypothetical protein
	DVUA0118	sctL	Type III secretion cytoplasmic protein (YscL)
	DVUA0119	sctN	Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN)
	null		Type III secretion spans bacterial envelope protein (YscO)
	DVUA0120		HpaP protein; Type III secretion protein (YscP)
	DVUA0121		Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
	DVUA0122	yscR	Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
	DVUA0123		anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV
	DVUA0124	rsbW	putative anti-sigma regulatory factor, serine/threonine protein kinase
	DVUA0125	slt	transglycosylase, SLT family

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of DVUA0100 in Desulfovibrio vulgaris Hildenborough

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --