Regulon of AraR in Bacteroides cellulosilyticus DSM 14838
| Regulator type: | Transcription factor |
| TF locus tag: | BACCELL_05606 |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - NrtR
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -39
Score: 5.4 Sequence: TATGTGTATTTTTGACACCCA
Locus tag: BACCELL_00858
Name: abn3 Funciton: Arabinoxylan arabinofuranohydrolase, GH43 family
Locus tag: BACCELL_00859
Name: agaL Funciton: alpha-glucosidase, GH97 family
Locus tag: BACCELL_00860
Name: abf3 Funciton: alpha-N-arabinofuranosidase, GH51 family
Locus tag: BACCELL_00861
Name: abf4 Funciton: alpha-N-arabinofuranosidase, GH51 family
Locus tag: BACCELL_00862
Name: bgaL Funciton: beta-galactosidase, GH2 family
Locus tag: BACCELL_00863
Name: abn4 Funciton: arabinan endo-1,5-alpha-L-arabinosidase, GH43 family |
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abn3
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Arabinoxylan arabinofuranohydrolase, GH43 family
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agaL
|
alpha-glucosidase, GH97 family
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abf3
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alpha-N-arabinofuranosidase, GH51 family
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abf4
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alpha-N-arabinofuranosidase, GH51 family
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bgaL
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beta-galactosidase, GH2 family
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abn4
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arabinan endo-1,5-alpha-L-arabinosidase, GH43 family
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Position: -84
Score: 5.6 Sequence: CAAGTGTTACTAATACACTCA
Position: -60
Score: 5.8 Sequence: AAAGTGTTACTTTTACACCCA
Locus tag: BACCELL_05604
Name: araM Funciton: L-arabinose mutarotase
Locus tag: BACCELL_05605
Name: araP Funciton: Predicted sodium-dependent arabinose transporter, MFS family
Locus tag: BACCELL_05606
Name: araR Funciton: Transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACCELL_05607
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACCELL_05608
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACCELL_05609
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: BACCELL_05610
Name: COG3533 Funciton: COG3533 secreted protein
Locus tag: BACCELL_05611
Name: abf1 Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family |
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araM
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L-arabinose mutarotase
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araP
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Predicted sodium-dependent arabinose transporter, MFS family
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araR
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Transcriptional regulator for arabinose utilization, NrtR family
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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araB
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Ribulokinase (EC 2.7.1.16)
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COG3533
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COG3533 secreted protein
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abf1
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Alpha-N-arabinofuranosidase (EC 3.2.1.55), GH51 family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |