Regulon of XylR in Bacteroides vulgatus ATCC 8482

Properties
Regulator type:	Transcription factor
TF locus tag:	BVU_3955
Regulator family:	NrtR
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Regulog:	XylR - Bacteroidaceae
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 43 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - NrtR
By effector - Xylose
By pathway - Xylose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -41 Score: 5.9 Sequence: GTTATTGTATTTATTACGAAAAC Locus tag: BVU_4073 Name: xylE Funciton: D-xylose proton-symporter XylE
	BVU_4073	xylE	D-xylose proton-symporter XylE
Position: -169 Score: 5.1 Sequence: TATATTGTAGTGTATATGATAAG Position: -136 Score: 4.5 Sequence: GATATTGTATGATGGATGATATT Locus tag: BVU_3955 Name: xylR Funciton: Predicted regulator of xylose utilization, NrtR family Locus tag: BVU_3954 Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) Locus tag: BVU_3953 Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5)
	BVU_3955	xylR	Predicted regulator of xylose utilization, NrtR family
	BVU_3954	xylB	Xylulose kinase (EC 2.7.1.17)
	BVU_3953	xylA	Xylose isomerase (EC 5.3.1.5)
Position: -91 Score: 4.6 Sequence: ATAATTGTTTTTTAGACAATAAA Position: -31 Score: 5.1 Sequence: ATATTTGTACATTATACAATATC Locus tag: BVU_2979 Name: SSF48208 Funciton: hypothetical Six-hairpin glycosidase-like
	BVU_2979	SSF48208	hypothetical Six-hairpin glycosidase-like
Position: -110 Score: 5.9 Sequence: CTTTTTGTATAAAAAACAATATC Locus tag: BVU_1162 Name: GH3_Xyl Funciton: Glycoside hydrolase family 3, candidate beta-glycosidase
	BVU_1162	GH3_Xyl	Glycoside hydrolase family 3, candidate beta-glycosidase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD