Profile of regulator XylR in Bacteroidaceae
Properties
| Regulator family: |
NrtR |
| Regulation mode: |
repressor |
| Biological process: |
Xylose utilization |
| Effector: |
Xylose |
| Regulog: |
XylR - Bacteroidaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bacteroides cellulosilyticus DSM 14838
|
|
BACCELL_04758 |
xylR |
-119 |
5.8 |
GATATTGTAAAATGTACGATATC |
|
BACCELL_04758 |
xylR |
-200 |
5.6 |
CTTATTGTACTTCCTACAATTAC |
|
BACCELL_04758 |
xylR |
-152 |
5.7 |
CATATTGTACTTTCAACGATAAG |
|
BACCELL_05612 |
tkt |
-161 |
5.9 |
CTTATTGTATTTTAAACAAGAAG |
|
Bacteroides dorei DSM 17855
|
|
BACDOR_00865 |
xylR |
-70 |
4.9 |
CATATTGTATAATAGATGATATT |
|
BACDOR_00759 |
xylE |
-41 |
5.9 |
GTTATTGTATTTATTACGAAAAC |
|
BACDOR_00865 |
xylR |
-103 |
5.1 |
TATATTGTAGTGTATATGATAAG |
|
BACDOR_01992 |
GH3_Xyl |
-110 |
5.6 |
CTTTTCGTACAAAAAACAATATC |
|
BACDOR_04539 |
SSF48208 |
-91 |
4.6 |
ATAATTGTTTTTTAGACAATAAA |
|
BACDOR_04539 |
SSF48208 |
-31 |
5.1 |
ATATTTGTACATTATACAATATC |
|
Bacteroides eggerthii DSM 20697
|
|
BACEGG_02642 |
xylR |
-208 |
5.1 |
GTTATTGTGCCTATTACAATTAC |
|
BACEGG_02642 |
xylR |
-161 |
6.1 |
CATATTGTATTTTGTACGATAAC |
|
BACEGG_02642 |
xylR |
-128 |
5.4 |
GATATTGTAAAAGATATGATATG |
|
BACEGG_01528 |
tkt |
-166 |
5.6 |
CTTATTGTAATCAAAACAAGAAG |
|
Bacteroides fragilis NCTC 9343
|
|
BF2354 |
xylR |
-280 |
5.4 |
CATACCCTATAAAATACAATAAG |
|
BF2354 |
xylR |
-197 |
5.1 |
CTTTCTGTACTTTCTACAATTAC |
|
BF2354 |
xylR |
-150 |
5.7 |
CATATTGTTATCGATACAATAAG |
|
BF2354 |
xylR |
-117 |
5.4 |
CTTAGTGTAAAATTTACGATATG |
|
Bacteroides ovatus ATCC 8483
|
|
BACOVA_02532 |
xylR |
-116 |
5.4 |
CATATTGTAGAATGTATGATATG |
|
BACOVA_02532 |
xylR |
-149 |
5.4 |
CATATTGTAATTCGTAAGATAAC |
|
BACOVA_02532 |
xylR |
-195 |
5.6 |
GTTTTTGTACTTTATACAATTAC |
|
BACOVA_02532 |
xylR |
-279 |
6.1 |
CATATCGTTTAAAATACAATAAG |
|
BACOVA_01706 |
tkt |
-128 |
5.6 |
CTTATTGTATCACAAACAAGAAG |
|
Bacteroides plebeius DSM 17135
|
|
BACPLE_02263 |
xylR |
-147 |
5.8 |
CATATTGTATGAACTACAAAAAC |
|
BACPLE_02263 |
xylR |
-114 |
5.2 |
GATATTGTATCAAATAAGATATT |
|
Bacteroides stercoris ATCC 43183
|
|
BACSTE_01380 |
xylR |
-161 |
6.3 |
CATATTGTATTTTATACGATAAC |
|
BACSTE_01380 |
xylR |
-208 |
5.5 |
GTTATTGTATCTGCTACAATTAC |
|
BACSTE_01380 |
xylR |
-128 |
5.8 |
GATATTGTAAGATATACGATATG |
|
BACSTE_01846 |
tkt |
-161 |
5.3 |
GTTATTGTATTCAAAACAGGAAG |
|
Bacteroides thetaiotaomicron VPI-5482
|
|
BT0791 |
xylR |
-150 |
5.1 |
CATATTGTAATTCAGAAGATAAC |
|
BT0791 |
xylR |
-280 |
5.9 |
GATATCGTTTGAAATACAATAAG |
|
BT0791 |
xylR |
-196 |
5.7 |
CTTTTTGTACTTTATACAATTAC |
|
BT0791 |
xylR |
-117 |
5.4 |
CATATTGTAGATTGTATGATATG |
|
BT0347 |
tkt |
-162 |
5.3 |
CTTACTGTATTGTAAACAAGAAG |
|
Bacteroides uniformis ATCC 8492
|
|
BACUNI_00695 |
xylR |
-209 |
5.7 |
CTTATTGTACTTCCTACAATTAG |
|
BACUNI_00695 |
xylR |
-161 |
5.9 |
CATATTGTATTCCATACGATAAC |
|
BACUNI_00695 |
xylR |
-128 |
5.7 |
GATATTGTATAAAGTAAGATATG |
|
Bacteroides vulgatus ATCC 8482
|
|
BVU_3955 |
xylR |
-136 |
4.5 |
GATATTGTATGATGGATGATATT |
|
BVU_4073 |
xylE |
-41 |
5.9 |
GTTATTGTATTTATTACGAAAAC |
|
BVU_3955 |
xylR |
-169 |
5.1 |
TATATTGTAGTGTATATGATAAG |
|
BVU_1162 |
GH3_Xyl |
-110 |
5.9 |
CTTTTTGTATAAAAAACAATATC |
|
BVU_2979 |
SSF48208 |
-91 |
4.6 |
ATAATTGTTTTTTAGACAATAAA |
|
BVU_2979 |
SSF48208 |
-31 |
5.1 |
ATATTTGTACATTATACAATATC |
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Regulatory Sites
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