Regulon of XylR in Bacteroides stercoris ATCC 43183
| Regulator type: | Transcription factor |
| TF locus tag: | BACSTE_01380 |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - NrtR
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -161
Score: 5.3 Sequence: GTTATTGTATTCAAAACAGGAAG
Locus tag: BACSTE_01846
Name: tkt Funciton: Transketolase (EC 2.2.1.1)
Locus tag: BACSTE_01845
Name: rpi Funciton: Ribose 5-phosphate isomerase B (EC 5.3.1.6) |
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tkt
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Transketolase (EC 2.2.1.1)
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rpi
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Ribose 5-phosphate isomerase B (EC 5.3.1.6)
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Position: -208
Score: 5.5 Sequence: GTTATTGTATCTGCTACAATTAC
Position: -161
Score: 6.3 Sequence: CATATTGTATTTTATACGATAAC
Position: -128
Score: 5.8 Sequence: GATATTGTAAGATATACGATATG
Locus tag: BACSTE_01380
Name: xylR Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACSTE_01381
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) |
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xylR
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Predicted regulator of xylose utilization, NrtR family
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xylB
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Xylulose kinase (EC 2.7.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |